Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01216 ATGGAGGTAGGTCACGAAAACCTCATTCACAGTACCTTACATGTTGCAACCAAATCGCCTGGACAGCCTTTCATATGCCATAGCGCAGTTAATCAAATCAACTCCAAGGGAATCTGGTTTGGAGATGACCCACTTGCGTATTCTCTCCCCATTTTCTTGTGCCAACTTTTTCTCATGTTCATCTTCACCCATGTCTTTTACATTATTCTCAAGCCTGTTGGTCAACCGACTTTTGTTTCTCAAATTCTTCAGGGTGGTATGACTTTAGGTCCTTCTGTTCTTGGACACAGTGCAACATTTAACGAGAGGGTTTTCCCATTAAAAGAGAGAAGTGTGCTTGATACAATGACTTTTTTTGGATTTATGTTATTCATCTTCTTATGTGGGGTAAAGATAGATCCAACCATAACTTTTAGATTAGGTAGAAGGAATTGTGTCATAGGAATTACAACCTATTTTGTTCCTTACATTCTTGGCAAAGTGGTTTACTATATCCTCACCCATTCGGTATCATTTGATAGTGATACTTATAATATACTCTATATTGTGATAGAAATTCAATGTATTGCAGCCTTTCCGGTAATTACTCGCTTTCTTTCTGAATTTGAAATCCTCAATTCAGAGATTGGGAGGTTGGCCGCTTCTTCTTCAATAGTGGCTGAGGTTTGCTTCATTGTAAACATGACAATAACATTTTTTATAAAGTTATCTTTTACAAAGTCAATAGTAGTATCTTTTGGATCTCTCTTGTCCTCCCTTGTACTTTTTTCGTTCGTCATATTTGTAGTTCACCCTGCTGCGTTATGGGCAATTCAACAATCACCAGAAGGAAAACCTGTGGAAGAAATTTACATTTGTGGAGTTCTTGTAACAGTAATGGTTGGTGGACTCCTAGGTGAAATCATTGGCATAAATGCACTTGTCGTGTCTTTCTTTATAGGGCTAGCTATACCTGATGGTCCGCCCTTAGGAGCAGCACTGGTAGACAAGCTTGATTGCTTTGTTTCTGTAGTGTGCATACCTATGCTTTTTATCGTAGTTGGATTAAGGACAAATGTCTATGCCATACAGACCATGAAGAACATACTTGGAATTCAATTAATCATTTGCACTATTTTTTGTGGCAAAGTTTTAGGGGCTCTGTTGCCTCTCCTTTACCTTAGGATGCCAATTCGTGATGCCTTTGCTCTTGGTTTTATAATGAACATCAAAGGCACGATTGAAATGGCCTTGTTGATTACTTTGAAATTGAAAGATATGATGAATGATGAATGCTTTACAGTTATGGTTCTAAATTTGCTTCTTGTAAGCGGGATTGCGTCCCCTATTGTAAAAAATCTATATGATCCTTCAAGGAGATTTCTTGCTTACAAAAGGAGGACACTTGTGCATCACAACAGTGATGAACCGTTGCGCCTACTAGCCTGCATTCATAAACAAGAAAATGTTTTGGCTATTTTAAACCTCCTTTCTGCTTCCAATCCCACTAAAGAAAGCCCTATTGATTTAGTTTTGCTCCAACATATTAAGCTTGAGGGGCGATCTTCCTCTGTTCTTGTTGCACATGTGCCTTGTAAGTTGGGGGCACATTCTACTCTAACTGAACAGATTTTTAACTCATTCGACAAGTTTGAAGATGCATACAAGGGCAAGATCTCAATACATAGCTATAAAGGCATTTCTCCCTATGCTACAATGCATAATGATGTGTGCTACTTGGCACTTGAAAAGAGAACAACTTTTATCATATTACCCTTTCATAAGCGATGGATATTTGGAAGGACAACTGAGTCGTTTTTTCCTTTTCAGCAACTGAACAAGAATGTTTTAGAGAAGGCTCCTTGCTCAGTTGGTGTCCTTATTGATCGTGGCAATCAGAAGATGTTTTGGTGTGGCCACACAAAGGAATCAACATATCAAGTGGCTGTGTTTTTCTTTGGGGGTGCAGATGATCGAGAAACACTTGCATATGCAAGGCGTATGTTGGATCAACCTTATGTCCACATTACACTCTTTCGTTTTTCATCTTCAACTGATATTGTTGGAGGAACAGAAACTAGCAAAATGCTTGACTCAGAAATCTTAAGTGAATTTAGGCTTAAGGCCTTCCGAAATGAGAGAGTTTCTCTCAAAGATGAGATGATAATAACTGGAAGAGATTTACTTTCAGTTGTTGAATACATGGAGAGTTGTTATGACCTTATCATGGTTGGGAGGAAGCATGGTGATTCAAAAGTAATGTCAGAACTTAACAAATGGAAAAATGGGGAATTGGGAGTTATTGGAGAGATTCTTATCTCTTTAAATATTGGATCCCAAACATCTATTTTAGTGGTGCAACAACAAACCAGATATTGGGGATCACGTAATCCAGAGGACTCTGTAAGAAAAGTATAA 2397 0.383 MEVGHENLIHSTLHVATKSPGQPFICHSAVNQINSKGIWFGDDPLAYSLPIFLCQLFLMFIFTHVFYIILKPVGQPTFVSQILQGGMTLGPSVLGHSATFNERVFPLKERSVLDTMTFFGFMLFIFLCGVKIDPTITFRLGRRNCVIGITTYFVPYILGKVVYYILTHSVSFDSDTYNILYIVIEIQCIAAFPVITRFLSEFEILNSEIGRLAASSSIVAEVCFIVNMTITFFIKLSFTKSIVVSFGSLLSSLVLFSFVIFVVHPAALWAIQQSPEGKPVEEIYICGVLVTVMVGGLLGEIIGINALVVSFFIGLAIPDGPPLGAALVDKLDCFVSVVCIPMLFIVVGLRTNVYAIQTMKNILGIQLIICTIFCGKVLGALLPLLYLRMPIRDAFALGFIMNIKGTIEMALLITLKLKDMMNDECFTVMVLNLLLVSGIASPIVKNLYDPSRRFLAYKRRTLVHHNSDEPLRLLACIHKQENVLAILNLLSASNPTKESPIDLVLLQHIKLEGRSSSVLVAHVPCKLGAHSTLTEQIFNSFDKFEDAYKGKISIHSYKGISPYATMHNDVCYLALEKRTTFIILPFHKRWIFGRTTESFFPFQQLNKNVLEKAPCSVGVLIDRGNQKMFWCGHTKESTYQVAVFFFGGADDRETLAYARRMLDQPYVHITLFRFSSSTDIVGGTETSKMLDSEILSEFRLKAFRNERVSLKDEMIITGRDLLSVVEYMESCYDLIMVGRKHGDSKVMSELNKWKNGELGVIGEILISLNIGSQTSILVVQQQTRYWGSRNPEDSVRKV 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01216 798 Gene3D - 51 454 IPR038770 -
Viun6g01216 798 PANTHER CATION/H + ANTIPORTER 26 784 - -
Viun6g01216 798 Pfam Sodium/hydrogen exchanger family 58 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01216 Viun-Chr6 21424121 21427657 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01216 25 793 Antiporter Super Family AT2G13620 36.272 1.46e-166 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01216 K26731 - gmx:102665255 1160.98