Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01215 ATGGAGGTAGGTCACGAAAACCTCATTCACAGTACCTTACATGTTGCAACCAAATCGCCTGGACAGCCTTTCATATGCCATAGCGCAGTTAATCAAATCAACTCCAAGGGAATCTGGTTTGGAGATGACCCACTTGCGTATTCTCTCCCCATTTTCTTGTGCCAACTTTTTCTCATGTTCATCTTCACCCATGTCTTTTACATTATTCTCAAGCCTGTTGGTCAACCGACTTTTGTTTCTCAAATTCTTGGTGGTATGACTTTAGGTCCTTCTGTTCTTGGACACAGTGCAACATTTAACGAGAGGGTTTTCCCATTAAAAGAGAGAAGTGTGCTTGATACAATGACTTTTTTTGGATTTATGTTATTCATCTTCTTATGTGGGGTAAAGATAGATCCAACCATAACTTTTAGATTAGGTAGAAGGAATTGTGTCATAGGAATTACAACCTATTTTGTTCCTTACATTCTTGGCAAAGTGGTTTACTATATCCTCACCCATTCGGTATCATTTGATAGTGATACTTATAATATACTCTATATTGTGATAGAAATTCAATGTATTGCAGCCTTTCCGGTAATTACTCGCTTTCTTTCTGAATTTGAAATCCTCAATTCAGAGATTGGGAGGTTGGCCGCTTCTTCTTCAATAGTGGCTGAGGTTTGCTTCATTGTAAACATGACAATAACATTTTTTATAAAGTTATCTTTTACAAAGTCAATAGTAGTATCTTTTGGATCTCTCTTGTCCTCCCTTGTACTTTTTTCGTTCGTCATATTTGTAGTTCACCCTGCTGCGTTATGGGCAATTCAACAATCACCAGAAGGAAAACCTGTGGAAGAAATTTACATTTGTGGAGTTCTTGTAACAGTAATGGTTGGTGGACTCCTAGGTGAAATCATTGGCATAAATGCACTTGTCGTGTCTTTCTTTATAGGGCTAGCTATACCTGATGGTCCGCCCTTAGGAGCAGCACTGGTAGACAAGCTTGATTGCTTTGTTTCTGTAGTGTGCATACCTATGCTTTTTATCGTAGTTGGATTAAGGACAAATGTCTATGCCATACAGACCATGAAGAACATACTTGGAATTCAATTAATCATTTGCACTATTTTTTGTGGCAAAGTTTTAGGGGCTCTGTTGCCTCTCCTTTACCTTAGGATGCCAATTCGTGATGCCTTTGCTCTTGGTTTTATAATGAACATCAAAGGCACGATTGAAATGGCCTTGTTGATTACTTTGAAATTGAAAGATATGATGAATGATGAATGCTTTACAGTTATGGTTCTAAATTTGCTTCTTGTAAGCGGGATTGCGTCCCCTATTGTAAAAAATCTATATGATCCTTCAAGGAGATTTCTTGCTTACAAAAGGAGGACACTTGTGCATCACAACAGTGATGAACCGTTGCGCCTACTAGCCTGCATTCATAAACAAGAAAATGTTTTGGCTATTTTAAACCTCCTTTCTGCTTCCAATCCCACTAAAGAAAGCCCTATTGATTTAGTTTTGCTCCAACATATTAAGCTTGAGGGGCGATCTTCCTCTGTTCTTGTTGCACATGTGCCTTGTAAGTTGGGGGCACATTCTACTCTAACTGAACAGATTTTTAACTCATTCGACAAGTTTGAAGATGCATACAAGGGCAAGATCTCAATACATAGCTATAAAGGCATTTCTCCCTATGCTACAATGCATAATGATGTGTGCTACTTGGCACTTGAAAAGAGAACAACTTTTATCATATTACCCTTTCATAAGCGATGGATATTTGGAAGGACAACTGAGTCGTTTTTTCCTTTTCAGCAACTGAACAAGAATGTTTTAGAGAAGGCTCCTTGCTCAGTTGGTGTCCTTATTGATCGTGGCAATCAGAAGATGTTTTGGTGTGGCCACACAAAGGAATCAACATATCAAGTGGCTGTGTTTTTCTTTGGGGGTGCAGATGATCGAGAAACACTTGCATATGCAAGGCGTATGTTGGATCAACCTTATGTCCACATTACACTCTTTCGTTTTTCATCTTCAACTGATATTGTTGGAGGAACAGAAACTAGCAAAATGCTTGACTCAGAAATCTTAAGTGAATTTAGGCTTAAGGCCTTCCGAAATGAGAGAGTTTCTCTCAAAGATGAGATGATAATAACTGGAAGAGATTTACTTTCAGTTGTTGAATACATGGAGAGTTGTTATGACCTTATCATGGTTGGGAGGAAGCATGGTGATTCAAAAGTAATGTCAGAACTTAACAAATGGAAAAATGGGGAATTGGGAGTTATTGGAGAGATTCTTATCTCTTTAAATATTGGATCCCAAACATCTATTTTAGTGGTGCAACAACAAACCAGATATTGGGGATCACGTAATCCAGAGGACTCTGTAAGAAAAGTATAA 2394 0.3826 MEVGHENLIHSTLHVATKSPGQPFICHSAVNQINSKGIWFGDDPLAYSLPIFLCQLFLMFIFTHVFYIILKPVGQPTFVSQILGGMTLGPSVLGHSATFNERVFPLKERSVLDTMTFFGFMLFIFLCGVKIDPTITFRLGRRNCVIGITTYFVPYILGKVVYYILTHSVSFDSDTYNILYIVIEIQCIAAFPVITRFLSEFEILNSEIGRLAASSSIVAEVCFIVNMTITFFIKLSFTKSIVVSFGSLLSSLVLFSFVIFVVHPAALWAIQQSPEGKPVEEIYICGVLVTVMVGGLLGEIIGINALVVSFFIGLAIPDGPPLGAALVDKLDCFVSVVCIPMLFIVVGLRTNVYAIQTMKNILGIQLIICTIFCGKVLGALLPLLYLRMPIRDAFALGFIMNIKGTIEMALLITLKLKDMMNDECFTVMVLNLLLVSGIASPIVKNLYDPSRRFLAYKRRTLVHHNSDEPLRLLACIHKQENVLAILNLLSASNPTKESPIDLVLLQHIKLEGRSSSVLVAHVPCKLGAHSTLTEQIFNSFDKFEDAYKGKISIHSYKGISPYATMHNDVCYLALEKRTTFIILPFHKRWIFGRTTESFFPFQQLNKNVLEKAPCSVGVLIDRGNQKMFWCGHTKESTYQVAVFFFGGADDRETLAYARRMLDQPYVHITLFRFSSSTDIVGGTETSKMLDSEILSEFRLKAFRNERVSLKDEMIITGRDLLSVVEYMESCYDLIMVGRKHGDSKVMSELNKWKNGELGVIGEILISLNIGSQTSILVVQQQTRYWGSRNPEDSVRKV 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01215 797 PANTHER CATION/H + ANTIPORTER 26 783 - -
Viun6g01215 797 Pfam Sodium/hydrogen exchanger family 58 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Viun6g01215 797 Gene3D - 51 453 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01215 Viun-Chr6 21424121 21427657 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01215 25 792 Antiporter Super Family AT2G13620 36.318 1.94e-168 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01215 K26731 - gmx:102665255 1165.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01215 6 21424121 21427657 Viun6g01215 6 21424121 21427657 ECH