Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01208 ATGTACAAGGGTGGTATCATCGTTGGACCGTCCCTTCTGGGGAGCAATCTATGGTACCGAAGTCACATGACAACCGAGACAACACGGTTCATAATAAACAACATCGGAGTATTGGGATTCCTGTTGTTTCTTTTCATTTATGGTGTGAAGATAGATCCAGGTCTTCTAAAAAGAACAGGGAAGGTTCATGTATCTACTGCATTGATGAGCATGATAATTCCGTCATCGACAGTGTTTGCTGTGGCACTAACGATGAGAAAGGACATGGACGAAAATTTTGCGAAGATTTCGTCTCTAGGATCAATAGCGGCATACTTGGGGACATCATCGTTCCCAACTCTCTACCATATCCTTGAAGAGTTCAACCTTCTAAATTCAGATGCGGGTCGAATATCATTGGCCTCGTCGATGATCGGTGACGCGTTTGGTTTGTTTTCTCTCTTAGCGTTTGAGGCTGCAGAGCTTGGAGAATTAGGGATAATGAGAGCGGTGTGGTATCTGATTTCTCTTGTGTTGGTCATATCGTTCCTTGCGTTTTGTGTTAGACCTGCAATGATATGGATCAACAAGCACACTTCTGAAGGGCACCCATTGAAAGAAACCTACGTAGTTATCATTCTTCTAGCAGCTTTTTTCATGGCTCTCGTAACTGACGTATTGGGCATAGCCATTGCTTGTGGACCTTTGTTTTTAGGGTTGGCGATTCCAGATGGGCCTCATGTGGGAGCAACACTTGAAAAGAAAACCGCAGCAATTCTGGGTGATTTCCTTCTACCATTCTCCTTCTTCATGGTGGGAACATACACTGATTTTTATGCCATGTCTGCTTCTGGTTGGTCCCACTTATCACCATTGTTTATCATGGTCGTAATTGGTTACTTTGTCAAATTCTTCACCACTTGGATTACTCTGCATCTCTTTCGAATGCCCTTCAGGGATGCTCTAACCGTGAGCCTCATCATGGGCTTAAGAGGCCAAGTTGAACTTGTATTGTTTGTGCATTGGATAGACAAAAGCATCGTGATGGTGCCGGGCTTCTCATTGTTGGTACTTCTGACAGGAACAGTGACAGCAATTTCTTGTCCTTTGATCTCTATATTGTATGATCCAACAAAGCCATACATGGTGAACCAAAGAAGAACCATTCAACATCATCCTCCAGACAAAGAGCTTAGGATAGTGTTATGCATTTTTGAGCAAGATGCCATACATGGTCTCACACATCTACTTGATATCTCGAATCCAAACCAGAACTGTCCCTTTTCGATTTCAGCTGTTAGACTGAGCGAGCTCGTAGGTCGAGTCAACCCTCTGTTCATAGACCATGAAAAGCAACAAGTGCCTCCCAATTATCAATGGTGTAGCACCATACACGTGCTTGAACGTCATCAACAACTCAAAGAACCCTACATGAAGTTTCATTTCTTCACAGCTGTCACCCCGAAAAAGACCATGTTCCGAGACATATGCGAGCTTGCCCTAGAACAAGAAGCTTCTTTGATCATCTTACCTTTCAACACCGGTGATGTTCATAACCATGTGAATTCTCAAGTCTTGAACAACGCACCTTGCACAGTGGCAATCTTCGTTGACAAGGGTCTTCTTAAGACCAATAACACCTTGGGAAGTTTTCGAAGAAGTAGATATCGATTTGCCGTGTTGTTTCTCGGTGGTGGAGATTCCAGAGAGGCTCTTGTTTATGCAGATAAGATGCTTGCTCGCGATCAGGTGTCTCTCACAGTTATAAGGTTTCTCACTCACAACTTCATAGGGTACAACGAAATCGAGAAGAAGCTTGACGATGGAATTGTGACCTGGTTCTGGGTTAAGAATGAGATTAATCAGAGAGTGGTTTATAGAGAAGTGGTGGTTAGAAATGGAGAAGAAACTATCGCAGCGATTCAGGCTATGAACGATGGTGCTTTTGATCTTTTGATAGTGGGAAGGAAACAAGGGATAAACCCTATTCTTCTCACTGGTTTATCTGATTGGATTGAAACTGAAGAGTTGGGACTCATTGGAGATTATGTTTCCTCCTCAGATTTTTTTGGCTCGGCTTCTGTGTTAGTTATTCAACAACAAACCTTACGAGGTTAA 2097 0.4306 MYKGGIIVGPSLLGSNLWYRSHMTTETTRFIINNIGVLGFLLFLFIYGVKIDPGLLKRTGKVHVSTALMSMIIPSSTVFAVALTMRKDMDENFAKISSLGSIAAYLGTSSFPTLYHILEEFNLLNSDAGRISLASSMIGDAFGLFSLLAFEAAELGELGIMRAVWYLISLVLVISFLAFCVRPAMIWINKHTSEGHPLKETYVVIILLAAFFMALVTDVLGIAIACGPLFLGLAIPDGPHVGATLEKKTAAILGDFLLPFSFFMVGTYTDFYAMSASGWSHLSPLFIMVVIGYFVKFFTTWITLHLFRMPFRDALTVSLIMGLRGQVELVLFVHWIDKSIVMVPGFSLLVLLTGTVTAISCPLISILYDPTKPYMVNQRRTIQHHPPDKELRIVLCIFEQDAIHGLTHLLDISNPNQNCPFSISAVRLSELVGRVNPLFIDHEKQQVPPNYQWCSTIHVLERHQQLKEPYMKFHFFTAVTPKKTMFRDICELALEQEASLIILPFNTGDVHNHVNSQVLNNAPCTVAIFVDKGLLKTNNTLGSFRRSRYRFAVLFLGGGDSREALVYADKMLARDQVSLTVIRFLTHNFIGYNEIEKKLDDGIVTWFWVKNEINQRVVYREVVVRNGEETIAAIQAMNDGAFDLLIVGRKQGINPILLTGLSDWIETEELGLIGDYVSSSDFFGSASVLVIQQQTLRG 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01208 698 Pfam Sodium/hydrogen exchanger family 5 353 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Viun6g01208 698 Gene3D - 3 373 IPR038770 -
Viun6g01208 698 PANTHER CATION/H + ANTIPORTER 4 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01208 Viun-Chr6 21360894 21363075 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01208 4 694 Antiporter Super Family AT5G37060 40.710 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01208 K26731 - gmx:100783296 959.518