Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01183 ATGGCCGCAGCGTTGGAGTGCTGGTCGCGCCGCACCACCAGTGACGAGGATGACGCATTTCTCGCTGCGCATTCTTCGCAACCCCGGGACTCTTCTTCTTCGTCTTCTCCCTCTTCCTCTCTCGTCCACAAGAAGCTCCTCAAACTCACGCGCAACGTCTCTGAAGCTCTCGCATCCCTCAGAAACTCCCTTACCGCTATGAATGATTCTTCCAAGCCTGACGCACCTCGCAACTTAGTGTGGACCACCGTCGTGCGCAATCTCAGCCATATATACCCCGGGACCCATCTCCCTGAGAAGCTTGTCTGCAACATTCGCAAGCACTATGACTCCCTGCCTCTCAGTTATTCTCAGGCGGGGTTTGATGTGAAAGATGTGTTTCTTCACATGAAGCTGATGGAGCAAGCTTTGGAAGATGAGCAGGCTGCGATTTTGATTCAAGAGGAGGGGGACGGCGAGATTCAACTTCAGGGGTCTTTGTTAAAGTTGACATTCGCTTGCAACTCTCCTATTTCATGGTCCGCAATGTCAAGAGCGTTGGATGGTTACTCCATTTGTTGCAAGAAGATTCAGATATTTGAGAAGAAAGGATTCACCCTTGGGATTGTGCTTCTTCTTGTACTGTCTAGTGGTGGGCATGAGAAGTTGGTGACGACCCAGGTTGAAAACGCTCTCAAGATTTCCATGAAGAGGCCTAAAGCCAGTGGCGTGAAGCTTCCCTTTGGGCTTTGTGGATGTCAAGAAGAGAACACCAAAGAGAGAGGACATGGAGAGATTGAGGAAGATGGTGGTGATGCATGTTGTGGAAATGGGTTTGATAATTTTAGCCAAAAGATTCAGCTTCAGGTGCCATTACCTAGTTCATCTTTTCATGTAGCGGTAGATGAATGGCAGACTATTCAATCAGGTGGGGATGATATTGAAAAATGGTTGTTGAACTCTGATCGTCTTGAGTTTGCAGAACAGATTGGGCCCAATTCGTATAAGGGGATGTACATGGGGAAAAAAGTTAGCATCGAGAAGCTTAGAGGGTGTGATAAAGGGAACTCTTATGAGTTTGAGCTCAGGAAAGACCTGCTGGCATTGATGACCTGTGGTCATAGAAATATTATGCAATTTTTGGGTGTTTGTGTGGATGAAAACTATGGGTTATGTGTATTGACAAAACTTGTGGAAGGTGGATCTGTTCACGACTTAATGTTAAAGAATAAGAAGCTTTCGAGCAAGGATGTTGTAAGAATTGCAGTGGATGTGGCTGAGGGAATGAAGTTTATGAATGATCACGGTGTTGCATTCAGAGACCTTAATACGCAGAAGATTGTTTTGGATAAGCATGGGAATGCTTGCTTGGGTGATATGGGTATTGTCACTGTTTGCGAGAGTGTTGGAGAGGCAATGGAGTATGAAACTGATGGTTATCGGTGGCTAGCACCAGAGATAATTGCTAGTGATCCAGAGAGTGTAGCAGAGACATGGATGAGTAATGTTTATAGTTTTGGAATGATTATCTGGGAGATGGTAACTGGTGAGGTAGCATATTCTGCATATTCACCTGTGCAAGCAGCAGTTGGCATTGCTGCTTGTGGCCTAAGACCTGAAATCCCCAAGGATTGCCCTCAAATTCTGAAGTCTCTCATGATAAAGTGCTGGAACAACACCCCTTCAAAACGCCCTAACTTCTCTGAAATTTTGGCCATATTGTTGCAACAAAACAACTGCAATAGGTAA 1728 0.4566 MAAALECWSRRTTSDEDDAFLAAHSSQPRDSSSSSSPSSSLVHKKLLKLTRNVSEALASLRNSLTAMNDSSKPDAPRNLVWTTVVRNLSHIYPGTHLPEKLVCNIRKHYDSLPLSYSQAGFDVKDVFLHMKLMEQALEDEQAAILIQEEGDGEIQLQGSLLKLTFACNSPISWSAMSRALDGYSICCKKIQIFEKKGFTLGIVLLLVLSSGGHEKLVTTQVENALKISMKRPKASGVKLPFGLCGCQEENTKERGHGEIEEDGGDACCGNGFDNFSQKIQLQVPLPSSSFHVAVDEWQTIQSGGDDIEKWLLNSDRLEFAEQIGPNSYKGMYMGKKVSIEKLRGCDKGNSYEFELRKDLLALMTCGHRNIMQFLGVCVDENYGLCVLTKLVEGGSVHDLMLKNKKLSSKDVVRIAVDVAEGMKFMNDHGVAFRDLNTQKIVLDKHGNACLGDMGIVTVCESVGEAMEYETDGYRWLAPEIIASDPESVAETWMSNVYSFGMIIWEMVTGEVAYSAYSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNTPSKRPNFSEILAILLQQNNCNR 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01183 575 MobiDBLite consensus disorder prediction 19 39 - -
Viun6g01183 575 ProSiteProfiles Protein kinase domain profile. 317 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g01183 575 MobiDBLite consensus disorder prediction 25 39 - -
Viun6g01183 575 SUPERFAMILY Protein kinase-like (PK-like) 298 567 IPR011009 -
Viun6g01183 575 Pfam Protein tyrosine and serine/threonine kinase 348 566 IPR001245 GO:0004672|GO:0006468
Viun6g01183 575 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 71 567 - -
Viun6g01183 575 Gene3D Transferase(Phosphotransferase) domain 1 310 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01183 Viun-Chr6 21220783 21224787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01183 300 569 MAP Kinase Kinase Kinase AT2G17700 32.000 2.19e-51 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Viun6g01183 PK_Tyr_Ser-Thr 3.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01183 - - gmx:100811417 939.488