Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01179 ATGTCCATGGCTGGTACTGAGCAAGGTGAGAGATGCTCCTCCATCATCACCATACCCCTTTTGGAAGATGAAAGATTGCACCGAGTGAATGGCTCAGATGAAGTGTTGGATGCCAAAACTTGGGATCTGCACACATCTCATGAGGGTAACACCTCCTTTTTCAAGACCTGTTTCAATCTGATTAATGCCCTCTCAGGAGTTGGTATTATCTCCATGCCTTATGCACTGTCATCTGGGGGATGGTTAAGCATTTCACTACTATTTGTGATAGCCGTGGCTTGTTGTTACACTGGGATGTTGGTGAAAAGATGCATGGACATGGATCCTGATATCAGAACCTTCCCTGACATAGGTCAACGTGCATTTGGATACAAGGGGAGGTTGATGGTATCAATCGCCATGAATTCTGAGCTTTATCTTGTTGTAACAGGCTTTCTCATTTTAGAGGGTGACAACCTTAACAAATTAGTACCAAATATCCAAGTTAACCTTGCAGGGGTAACAATCGGTGGTGCAACAATTTTTACCATAGTTGCTGCTCTTGCTGTTCTTCCTAGTCTTCTGTTAGAGGATATGAGCATGCTCTCTTATGTGTCTGCAAGTGGGGCTTTGGCTTCTTCCATCTTCCTCCTCTCTCTGTTTTGGAATGGTACCATTGATGGCACTGGTTTTCATGCAAAGGGAAAACTCTTCAGATTCAGTGGAATACCTGCTGCTGCTAGCTTATATGCCTTCTGTTACAGTGCACATCCCATTCTTCCCACTCTCTACAATTCCATGAGAGACAAAACTCAGTTCTCCAGGGTTCTGTCTACGTGCTTTTCAGTGTGCACTCTTGGTTATGCAGCAGCAGGTGTTTTGGGGTACCTAATGTTTGGACAAGAGGTTGAATCACAGGTGACTTTGAACCTTCCAACAAGCAAGTTCAGTTCACATGTGGCAATATTCACCACCTTGGTCAATCCTATAACAAAATATGCATTGATGCTTACCCCAGTCATAAATGCTGTGAAAAACAAGATTTCATGGCACTACAACAAAAGATTCACACACACACTTGTTAGCACCTCCATTCTCGTAAGCTCTCTAATTGTAGCTGTGGCCATACCCTTGTTTGGATATCTCATGTCACTGATTGGGGCATTGCTGAGTGTGTCAGCTTCAATTCTAGTGCCATCAGTGTGCTACTTGAAGATTTCAGGAGCTTACAAGACTTTTGGGTCTGAAATGATCATCAACTATTCGATAATAGTGTTGGGGGTTACTATTGCTTGTGTGGGTACTTACACATCTCTTGTAGATATAGTTCATAACTTGTAA 1320 0.4295 MSMAGTEQGERCSSIITIPLLEDERLHRVNGSDEVLDAKTWDLHTSHEGNTSFFKTCFNLINALSGVGIISMPYALSSGGWLSISLLFVIAVACCYTGMLVKRCMDMDPDIRTFPDIGQRAFGYKGRLMVSIAMNSELYLVVTGFLILEGDNLNKLVPNIQVNLAGVTIGGATIFTIVAALAVLPSLLLEDMSMLSYVSASGALASSIFLLSLFWNGTIDGTGFHAKGKLFRFSGIPAAASLYAFCYSAHPILPTLYNSMRDKTQFSRVLSTCFSVCTLGYAAAGVLGYLMFGQEVESQVTLNLPTSKFSSHVAIFTTLVNPITKYALMLTPVINAVKNKISWHYNKRFTHTLVSTSILVSSLIVAVAIPLFGYLMSLIGALLSVSASILVPSVCYLKISGAYKTFGSEMIINYSIIVLGVTIACVGTYTSLVDIVHNL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01179 439 PANTHER AMINO ACID TRANSPORTER 44 430 - -
Viun6g01179 439 Pfam Transmembrane amino acid transporter protein 50 431 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01179 Viun-Chr6 21163927 21168184 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01179 36 436 Amino Acid or Auxin Permease AAAP Family AT3G28960 52.488 3.87e-153 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01179 K15015 - gmx:100784690 736.873