Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01177 ATGCCTTCTCCTGCTTCATCTGCAAACACTTCAAACACAAACCAACACGCTGTCATTATATGGTCCACACTTGGCGGCTTCTCCTTCATTTTGGTGTCACTCGTTGTTTTTCTTTGCTTCAGAAGCAACAAGGTTGTCACTGTAAAACCTTGGGCCACAGGGTTGAGTGGCCAGCTTCAGAAAGCCTTTTTAACAGGTGTTCCTAGTCTGAAAAGAACAGAACTTGAAGTAGCTTGTGAGTATTTCAGCAACATTATTGGTTCACTGCCTGATGGGACTGTTTATAAGGGGACTCTCTCCAGTGGAGTTGAGATAGCTGTAGTATCCTCTGCAGTGACTTCATCCCATAACTGGTCCAAAAATCTGGAAACTCAATTCCGAAAGAAGATAGCAATGTTGTCAAGAGTTAACCACAAAAATTTTGTGAATCTAATTGGATATTGTGAAGAGAATAAGCCATTCACAAGGATGATGGTTTTTGAGTATGCTCCAAATGGAACTCTATTTGAGCATCTACACATTCGAGAAGCAGAAAGACTAGACTGGGGAATGAGAATAAGGATAGCTATGGGAATAGCTTATTGTCTGGAGCACATGCATGAGCTGACACCACCCATTGCCTATAGAAACATACTATCTTCCTCTGTATATCTGACTGAAGATTATGCTGCTAAATTATCAGACTTTAGTTTCTGGACTGACATAGTCTCTACAAAGAAGGGTTCTGAATCTGCACAGCTCTTAGAAACAGCTCCAGAATATGTCAAGGCCAATGTTTACAGCTTTGGAGTACTATTGTTTGAATTGATTACAGGAAGAATTCCCTTCGCAGTGGAGAATGGTTTATTTGAAGATTGGGCAGCAGAATATATAAAGGGACAACCCTTGAGAGACATGGTGGATTCAAACCTGAACTCTTTGCAAGCAAATGAAATCGAGAAATGGGAAGAAGTGATTAACATCTGTGTAGATCCTGATCCAGAAAAAAGACCAACCATGAGGGAGGTTACTTCTAAGTTGAAGGAAATCACCACCATAGGACCTGACGGAGCAACTCCAAAAGCATCACCTCTTTGGTGGGCAGAAATAGAAATTATGTCCCCTGACTTAAGTTCAGACGTGAATCCATAA 1131 0.4111 MPSPASSANTSNTNQHAVIIWSTLGGFSFILVSLVVFLCFRSNKVVTVKPWATGLSGQLQKAFLTGVPSLKRTELEVACEYFSNIIGSLPDGTVYKGTLSSGVEIAVVSSAVTSSHNWSKNLETQFRKKIAMLSRVNHKNFVNLIGYCEENKPFTRMMVFEYAPNGTLFEHLHIREAERLDWGMRIRIAMGIAYCLEHMHELTPPIAYRNILSSSVYLTEDYAAKLSDFSFWTDIVSTKKGSESAQLLETAPEYVKANVYSFGVLLFELITGRIPFAVENGLFEDWAAEYIKGQPLRDMVDSNLNSLQANEIEKWEEVINICVDPDPEKRPTMREVTSKLKEITTIGPDGATPKASPLWWAEIEIMSPDLSSDVNP 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01177 376 FunFam Inactive receptor-like serine/threonine-protein kinase 54 162 - -
Viun6g01177 376 Gene3D Transferase(Phosphotransferase) domain 1 163 348 - -
Viun6g01177 376 PANTHER PROTEIN MALE DISCOVERER 2 6 367 - -
Viun6g01177 376 Pfam Protein tyrosine and serine/threonine kinase 85 340 IPR001245 GO:0004672|GO:0006468
Viun6g01177 376 Gene3D Phosphorylase Kinase; domain 1 41 162 - -
Viun6g01177 376 SUPERFAMILY Protein kinase-like (PK-like) 66 340 IPR011009 -
Viun6g01177 376 ProSiteProfiles Protein kinase domain profile. 80 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01177 Viun-Chr6 21149976 21154348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01177 74 345 Receptor kinase-like Gene Family AT4G31110 34.812 1.48e-41 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Viun6g01177 PK_Tyr_Ser-Thr 5.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01177 - - vun:114188256 747.273