Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01160 ATGGGATGGGACCTCTTCACAAAATTCAAAAACACACAAAATCAAAACTCAAACATCATTTCATCTCTCTCTGTGAGCTCTGTAAGCTCTGTAAGCTCTTCCATGGCGGAGTGTGTGACGGACATGGCTCAGGTTGCTCTGTGCCGGAACAGCACCGCTGCAGCACATTTGAAAGTGATTTCCATCTTCACAATCTTCGTAACCAGCGTGATGGGTGTGTCCATGCCTGTCATGCTAGCACGATACTTTCAAGGAAAGTCTCTCTATGATATAGCTATCTTGGTAATCAAATGTTTTGCCGCCGGTGTTATTCTCGCCACCTCACTGGTTCATGTGTTGCCGGACGCGTTTGCCGCACTCTCCGATTGCCAGGTGGCATCGCAGCATCCGTGGAAGGATTTTCCCTTTGCTGGCCTGGTGACTCTGGGTGGGGTTCTGCTGGCTCTGCTGGTGGACACTGTTGCCAGCTCTCACGTGGAGCATGCGCACTACACGGCGGTGGACACGGAGGAGAAGGAGGGTGGCGGTGGCTCATTGAGTATCGAGCTGGTAAGTGGCGGCGGCGGCGGCGGCGGCGGTGAAGCGGATAGGGTTGAAGAGTTGATGAGGTTGAAGCAGAAGCTGGTGTCGCAGGTGTTGGAGATAGGTATCATCTTTCACTCTGTTATCATCGGAGTCACTATGGGAATGTCCCAGAATGTTTGCACCATTCGCCCTCTCGTTGCTGCTTTGGCATTTCATCAGATTTTCGAAGGCTTAGGTCTCGGTGGTTGCATTGCTCAGGCAGGGTTTGGATTTGGAACAACTGCGTACATGTGTTTCATGTTCTCAGTGACAACACCAGTGGGGATAATTTTGGGGATGATGTTATTCTCAGTGACTGGTTATGATGATAGTAACCCTAAAGCTTTGATCATGGAAGGGTTACTGGGTTCAGTTTCTTCAGGGATATTAATTTACATGGCTCTGGTTGATCTCATAGCAGTTGATTTCTTTCATAACAAGCTTATGAACTCCAATTTGTGGCTCAAAAAATTCTCTTTTCTTGCTTTAACTCTTGGCTCTGCTTCAATGTCTGTTCTGGCACTTTGGGCCTGA 1098 0.4872 MGWDLFTKFKNTQNQNSNIISSLSVSSVSSVSSSMAECVTDMAQVALCRNSTAAAHLKVISIFTIFVTSVMGVSMPVMLARYFQGKSLYDIAILVIKCFAAGVILATSLVHVLPDAFAALSDCQVASQHPWKDFPFAGLVTLGGVLLALLVDTVASSHVEHAHYTAVDTEEKEGGGGSLSIELVSGGGGGGGGEADRVEELMRLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGLGLGGCIAQAGFGFGTTAYMCFMFSVTTPVGIILGMMLFSVTGYDDSNPKALIMEGLLGSVSSGILIYMALVDLIAVDFFHNKLMNSNLWLKKFSFLALTLGSASMSVLALWA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01160 365 PANTHER ZINC/IRON TRANSPORTER 54 359 - -
Viun6g01160 365 Pfam ZIP Zinc transporter 56 362 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Viun6g01160 365 NCBIfam ZIP zinc/iron transport family 43 365 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01160 Viun-Chr6 21019587 21021513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01160 35 365 Inorganic Solute Cotransporters AT2G30080 63.636 2.57e-151 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01160 K14709 - gmx:100784745 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01160 6 21019587 21021513 Viun6g01160 6 21019587 21021513 ECH
Viun6g01160 6 21019587 21021513 Viun8g01820 8 29143045 29145532 ECH
Viun6g01160 6 21019587 21021513 Viun8g01820 8 29143045 29145532 PCT