Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01097 ATGAGAAAGAAGAAGAAGCCCCTGGTGTTTATGGATGTGTCCATTGATGGAGATCCTGTTGAAAGGATGGTTTTCAAGCTTTTATCCAATGTTGCTCCCATGACTGCAGAAAACTTTCGTGCATTATGTACAGGAGAAAAAGGTACGAGTCCAAATACTGGAAAACCACTTGACTACAAGGGTTCTTTCTTCCATCAGGTTATAAAAGGTTCTATTGTGCAGGGAGGAGACTTTGTCAATCGAAATGGGACTGGTGGAGAAAGCATATATGGTTACAAGTTCCCGGGTGAGAATGCTAAGTCACAATCAAGAGCATATTCTGTCATGAATGTTGTACTATAG 342 0.4094 MRKKKKPLVFMDVSIDGDPVERMVFKLLSNVAPMTAENFRALCTGEKGTSPNTGKPLDYKGSFFHQVIKGSIVQGGDFVNRNGTGGESIYGYKFPGENAKSQSRAYSVMNVVL 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01097 113 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 100 IPR002130 GO:0000413|GO:0003755
Viun6g01097 113 SUPERFAMILY Cyclophilin-like 4 100 IPR029000 -
Viun6g01097 113 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Viun6g01097 113 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Viun6g01097 113 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 113 IPR002130 GO:0000413|GO:0003755
Viun6g01097 113 Gene3D - 1 111 IPR029000 -
Viun6g01097 113 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01097 Viun-Chr6 20315798 20319962 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01097 25 97 U-box Gene Family AT5G67530 38.356 4.04e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01097 K09566 - gmx:100785820 175.637