Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01093 ATGAAGGTTATCAGCCCAAGGAAGATGAGAAAGAAGAAGAAGCCCCTGGTGTTTATGGATGTGTCCATTGATGGAGATCCTGTTGAAAGGATGGTTTTCAAGCTTTTATCCAATGTTGCTCCCATGACTGCAGAAAACTTTCGTGCATTATGTACAGGAGAAAAAGGTACGAGTCCAAATACTGGAAAACCACTTGACTACAAGGGTTCTTTCTTCCATCAGGTTATAAAAGGTTCTATTGTGCAGGGAGGAGACTTTGTCAATCGAAATGGGACTGGTGGAGAAAGCATATATGGTTACAAGTTCCCGGGTGAGAATGCTAAGTCACAATCAAGAGCATATTCTGTCATGAATGTTGTACTATAG 366 0.4126 MKVISPRKMRKKKKPLVFMDVSIDGDPVERMVFKLLSNVAPMTAENFRALCTGEKGTSPNTGKPLDYKGSFFHQVIKGSIVQGGDFVNRNGTGGESIYGYKFPGENAKSQSRAYSVMNVVL 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01093 121 PIRSF Peptidylpro_ismrse 3 119 IPR024936 GO:0003755
Viun6g01093 121 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 17 111 - -
Viun6g01093 121 Gene3D - 2 119 IPR029000 -
Viun6g01093 121 SUPERFAMILY Cyclophilin-like 8 108 IPR029000 -
Viun6g01093 121 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 IPR002130 GO:0000413|GO:0003755
Viun6g01093 121 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 72 84 IPR002130 GO:0000413|GO:0003755
Viun6g01093 121 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 18 121 IPR002130 GO:0000413|GO:0003755
Viun6g01093 121 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 19 108 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01093 Viun-Chr6 20315693 20319962 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01093 33 105 U-box Gene Family AT5G67530 38.356 4.34e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01093 K09566 - gmx:100785820 175.637