Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01079 ATGGATTCGCACTGGAGCTCTCGCCAAACGTTTGAACGCTACCTTTATGATTATCTTGTCAAAAGAAACATGCACCACACTGCTGAGGTTTTCAGGAACGAGACTAATCTTCATCTGGGTCCCGCTGCTTCTTCCACTGATGCTGTGGATGTCCCAGAAGGATTTTTGCTGGAGTGGTGGTCTCTCAACAATGATTTTGAATACTTCAGACAAATGCATTTGCAGGAGAAACGTGGGTTGTTCAGAGGAATGCAAGGATGTAATGCTTTTCCAGAAGTAGGGTCTTCCATGAATGTTCGACCAAAGTATCAATTTCCTAATAATTTTACTCCTGTTAAAGCACTCAACATAGGAAGCAACTTGATGCCATCACGTGTAACTGGTGAATGGCCAGTATTTTCCTCATCTTCTGCACACCACAAAGGTAGTGGTAAACTGCCACAATGTCTATTCCCATTTTCCCATCAAGAGGCATTTGGTCAAATGCAACGACTTTCATCTTCACATCAAGACAAGGTGATGACACCAGTAGAGAAAACAACAGAGGTTTCCAATGTCAATAGTTCAGAAGCAAATTCTGGATTTATTGAGGAAACAGATCCGATCATTGAGAATTTGTTAAATTCTTTTTGGTTATTTGAACCTGATGAACCAAGCCTGTTTGACAAGTCAACAGTAGGACAGAGCAGCACAAATGCCGAGAGTTTGGTGGAACGTGGAATTGGAAACACTAGTATGAATACAATTGCTGGTTCACCATTGGAAGAGGATGATAACACAAGTGACACAAGTGATTCTTCCAGCAGTTTCCAATTTGTTCTTACTGATGAAGATGTTTCAACGGACCCTCAGTTGGAATCCAATGCAGAAACATAA 876 0.4132 MDSHWSSRQTFERYLYDYLVKRNMHHTAEVFRNETNLHLGPAASSTDAVDVPEGFLLEWWSLNNDFEYFRQMHLQEKRGLFRGMQGCNAFPEVGSSMNVRPKYQFPNNFTPVKALNIGSNLMPSRVTGEWPVFSSSSAHHKGSGKLPQCLFPFSHQEAFGQMQRLSSSHQDKVMTPVEKTTEVSNVNSSEANSGFIEETDPIIENLLNSFWLFEPDEPSLFDKSTVGQSSTNAESLVERGIGNTSMNTIAGSPLEEDDNTSDTSDSSSSFQFVLTDEDVSTDPQLESNAET 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01079 291 SMART Lish 7 39 IPR006594 GO:0005515
Viun6g01079 291 Pfam LisH 15 35 IPR006594 GO:0005515
Viun6g01079 291 MobiDBLite consensus disorder prediction 244 291 - -
Viun6g01079 291 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 1 73 IPR044716 GO:0003714
Viun6g01079 291 ProSiteProfiles LIS1 homology (LisH) motif profile. 7 39 IPR006594 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01079 Viun-Chr6 20223116 20236563 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Viun6g01079 LisH 3e-06 CL0561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01079 - - vra:106776158 446.047