Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01059 ATGGCAGAGCATAGTATGGATTATTGGAAAGAGTTGAGTGCTGATTGGTATGACTTGATTGGTCAGCCGTCGCACACCTTCCATGTTCCGGCAGCCTTGCAGAGCCAACCTGTCGCCGTTGCTATGGAAACTCCTTTAATGTTGCAGTCGCCGTCATTGCCATTATCCTCGTCATCGCTGTCATCGTTGTCATCGGCGTTGCCGTCATCAGCGTTGCCGTTTCCATCATCGGCGTTGCCGTTGCCGTCATCGTCGTTGCTGTCGTCGTTGACGTTTCAGTCGAACAAAAGAAAAAGGATAACTTGGACAGAAGCGGAGCATAAGCGGTTTCTAGAGGGACTTCATAAATATGGAAAAGGAGATTGGAAAAACATCTCAGCTTACATTCAAACGAAAACTGCAATTCAAGTTGCCAGTCATGCACAAAAATATTTTATCCGTCAAGCTCAAACACAACACCAAAAGAAGAGGAAAAGCATCCATGACATGGTTATGGAGAACGCATTTCATATGCAAAATTCATCTTCTTCTGGTGCAAGTTCACAGTTTTCCGATGTGCAACCACTACCCTTCAATCCTCACGTCAACGTGCCTCATCCACCAGAGCTACAACCCATGCGAGAAATGATGAACCAAAATCCTATGAATCCCAACAACATGATTCATCATCCTGCATACTTTAATCAAATGCAACCATGTTAA 702 0.4473 MAEHSMDYWKELSADWYDLIGQPSHTFHVPAALQSQPVAVAMETPLMLQSPSLPLSSSSLSSLSSALPSSALPFPSSALPLPSSSLLSSLTFQSNKRKRITWTEAEHKRFLEGLHKYGKGDWKNISAYIQTKTAIQVASHAQKYFIRQAQTQHQKKRKSIHDMVMENAFHMQNSSSSGASSQFSDVQPLPFNPHVNVPHPPELQPMREMMNQNPMNPNNMIHHPAYFNQMQPC 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01059 233 CDD SANT 101 145 IPR001005 -
Viun6g01059 233 Gene3D - 100 151 - -
Viun6g01059 233 ProSiteProfiles Myb-like domain profile. 94 145 IPR001005 -
Viun6g01059 233 NCBIfam myb-like DNA-binding domain, SHAQKYF class 98 148 IPR006447 GO:0003677
Viun6g01059 233 SUPERFAMILY Homeodomain-like 96 149 IPR009057 -
Viun6g01059 233 Pfam Myb-like DNA-binding domain 101 145 IPR001005 -
Viun6g01059 233 PANTHER TRANSCRIPTION FACTOR KUA1 70 224 - -
Viun6g01059 233 ProSiteProfiles SANT domain profile. 102 149 IPR017884 -
Viun6g01059 233 SMART sant 98 147 IPR001005 -
Viun6g01059 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 149 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01059 Viun-Chr6 20075702 20076403 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun6g01059 Myb_DNA-binding 1.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01059 - - vun:114188497 365.54