Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01022 ATGGTTACTCCTAATGGAAGAGCAATGCACAAGTCCGATGATGAAATTCCTTTTGACTCTGAAATAAATTTTCACCACTCAGAATCTAGTCTGGTGGAGGTACTTGGATCACATTCTGGAGAATCTCTGACTGTTCATCGTGAAACATTGGCTGGTATTGTTTATAGGAGCATACAAGTTGTGATTTTCTCTAACAAACTCAATTTGCTTATGCCTTTTGGGCCTCTTGCAATTCTTGTGCAGAAGTTGACTGCTCATCTTGGTTGGGTCTTTGCTCTGAGTTTGTTGGGTATAATGCCTCTGGCGGAGCGGTTAGGTTATGCTACCGAGCAGCTGGCATTTTACAGTGGAGATACTGTTGGGGGTCTTTTAAACGCTACATTTGGAAATGCAACAGAATTGATCATCTCAATATATGCACTGAAAAATGGAATGACACGGGTTGTCCAGCTCTCTTTACTGGGATCAATTTTGTCCAATATGTTACTGGTGCTTGGATGTGCATTCTTATGCGGTGGGATTGTTAATCATAAGAAAGAACAAGTGTTTAACAAGGCAAGTGCTTCTGTGAATTCAGGATTGTTGTTGATGGCAGTCATGGGCATACTTTTTCCAGCTGTTCTACACTACACACACACCGAGGTTCGTGTTGGGAAGTCAGAGTTGTTCCTTTCAAGATTCAGCAGCTGTGTCATGCTTGTGGCCTATGCTGCATACCTGTTTTTTCAGTTAAAAGGTCAAAGAAGTCTCTATGTATCTGTGGACGAGGAAGAGGTTCAGAGTGGAAACAACTCAAATGATGATGAATCACCAGATATTTCTAAATGGGAATCAATAATATGGCTTTCCGTTATGACTGCTTGGATATCAATCTTGTCTGAATACTTGGTTGGCGCTATAGAGGGAGCATCTACTGCATGGGAAATTCCAATTGCATTTATTAGTGTCATATTGCTTCCGCTAGTGGGTAATGCAGCAGAGCATGCCAGTGCTATAATGTTTGCAATGAAAGATAAACTTGACATTTCCTTAGCGGTTGCAATAGGTTCATCCACACAGATATCAATGTTTGTGATACCATTTTGTGTTGTTATTGGCTGGATAATGGGGAATTCTATGGACTTGAACTTTCAACTATTTGAAACTGCGGCACTATTTCTTACTGTTATAGTTGTAGCCTTCATGTTGCAGGAAGGAACTGCTAATTACTTCAAAGGACTAATGCTTATTCTTTGCTATCTGATTGTGGCAGCCAGTTTTTATGTACATATAGATTCCTCTGAATAG 1287 0.4033 MVTPNGRAMHKSDDEIPFDSEINFHHSESSLVEVLGSHSGESLTVHRETLAGIVYRSIQVVIFSNKLNLLMPFGPLAILVQKLTAHLGWVFALSLLGIMPLAERLGYATEQLAFYSGDTVGGLLNATFGNATELIISIYALKNGMTRVVQLSLLGSILSNMLLVLGCAFLCGGIVNHKKEQVFNKASASVNSGLLLMAVMGILFPAVLHYTHTEVRVGKSELFLSRFSSCVMLVAYAAYLFFQLKGQRSLYVSVDEEEVQSGNNSNDDESPDISKWESIIWLSVMTAWISILSEYLVGAIEGASTAWEIPIAFISVILLPLVGNAAEHASAIMFAMKDKLDISLAVAIGSSTQISMFVIPFCVVIGWIMGNSMDLNFQLFETAALFLTVIVVAFMLQEGTANYFKGLMLILCYLIVAASFYVHIDSSE 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01022 428 FunFam Vacuolar cation/proton exchanger 118 257 - -
Viun6g01022 428 Pfam Sodium/calcium exchanger protein 279 419 IPR004837 GO:0016020|GO:0055085
Viun6g01022 428 Pfam Sodium/calcium exchanger protein 87 244 IPR004837 GO:0016020|GO:0055085
Viun6g01022 428 Gene3D - 116 258 IPR044880 -
Viun6g01022 428 Gene3D - 264 422 IPR044880 -
Viun6g01022 428 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 37 425 IPR004713 GO:0006812|GO:0008324|GO:0016020
Viun6g01022 428 NCBIfam calcium/proton exchanger 57 420 - -
Viun6g01022 428 FunFam Vacuolar cation/proton exchanger 266 422 - -
Viun6g01022 428 NCBIfam calcium/proton exchanger 71 421 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01022 Viun-Chr6 19758031 19762722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01022 7 428 Antiporters AT1G55730 70.379 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01022 K07300 - gmx:100799276 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01022 6 19758031 19762722 Viun6g01022 6 19758031 19762722 ECH