Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01007 ATGCCACAAGAGAGTTGCCAAAACTCATTTTTCACATCTCCTTCAAAGAGAGGATTGAAGGGTTTGGTGGTCACCACCATGAACAAGGAGGCTTCATGCACTGTCACAGAGGAAGGTTTCAATGATAATGAATTGGCACAGAGGAAGGCAGAGGAAGCAGCTCGGAGAAGATACAAAGCAACAGAATGGCTACGCCAAATGGACAATGTTGCATCATTGTCTCTCACTGCAACACCCTCTGAAGAAGACTTTTGCCTTGCCCTACGCAATGGTCTCATTCTCTGCAATGTCCTCAACAAAGTCAACCCTGGTGCTGTTCTCAAGGTGGTGGAGAATCCTGGGCTTGCTGTTCAATGTGCAGAGGGTGCGGCCCACTCAGCAATTCAGTATTTTGAGAACATGAGGAATTTCTTAGAGGCTGTTAAGGAGATGCAGCTTCTCACATTTGAAGCATCTGATTTGGAGAAGGGAGGTTCATCCAATAAAGTTGTGGACTGCATTCTATGTTTGAAGGGGTTTTATGAATGGAAGTTATCTGGTGGGGTTGGTGTGTGGAGGTATGGTGGAACTGTGAGGATCACTTCCTTTCCAAAGAAGTCTCCTTCCTCCATAGTTGGCAGTGAAAGTGCTGATGAATCATTAGATGAGTCAGAGTCATCACAGTATGAACAACTGCTAGAATTTCTTCAATTATCTGAAGAGTTCTTGATTGAGGAAAGCAGAACTGCCAATGCTTTGGCTTTCCTTTATGATCACTTTGGACTCAGACTTCTTCAGGCTTACCTTAGAGAGGCCAATGGGATTGAAGATCTTCCTCTGAATGCAATGGTAATTGATACCTTACTCAGCAAGGTAGTCAAGGATTTCTCATCTTTGCTTGTTTCTCAAGGCACTCAGCTTGGACTTTTCTTGAAGAAAATATTGAAAGGTGACATGGGTTGTCTCTCAAAGAGAGAGTTCATAGAAACCATCTCACTATATCTTAACCAAAGAAGTAGCTTGGCATCAAATGACTTCTCCAAATTCTGCAATTGTGGTGGAAAACGTGATAGTATTCGACAAAATGGCAACTATTCTGCAAAATATGCTGAAGTAATCAACACTCAACAGAAACAACTTGAGGGTATGAAGTACTTTTTTGAAGAAACAAAATTGGAGGTCAAACAAATTCAATCAGAGTGGGAAGAAGAACTGAGTAGGCTAGAGGATCATATCAAAAGCCTTGAAGTGGCCTCCACTTCCTACCACAAAGTTTTGGAGGAGAACCGCCTTCTTTACAATGAAGTACAAGACCTTAAAGGAGCCATTAGGGTTTATTGTAGAGTGAGGCCATTCTTACCAGGACAATCAAATGGGCAGTCTACGGTGGACTATATTGGAGAAAATGGAGATATGATGATCATAAATCCCCTTAAGCATGGAAAAGATGCTAGACGAGTATTTTCATTCGATAAGGTTTTTGGAACAACCGTAACACAAGAACAAATTTATGCTGACACTCAGCCCTTGATCAGATCCGTTCTAGATGGTTATAATGTATGCATCTTTGCATACGGGCAGACTGGTTCAGGGAAAACATACACAATGAGTGGCCCTGATCTTACAACAGAAGAGACATGGGGTGTAAACTACAGGGCTTTGGGTGATTTATTTCATATATCAAAGGAAAGGTCTGATTCCATAAAGTATGAAGTTTTCGTTCAGATGATTGAAATATACAATGAACAAGTGAGAGATTTGCTAGTCAGTGATGGCTCTAACAGAAGATTAGACATTCGAAACAATTCTCAAATGAATGGCATCAATGTGCCTGATGCATTTTTAGTTCCTGTTACCTGTACTCAAGATGTTCTAGACTTGATGAGAATTGGTCAGAAGAACCGTGCCGTGGGTGCTACAGCTCTAAATGAGAGAAGCAGTCGTTCCCATAGTGTTTTGACTGTTCATGTTAGAGGAAGGGAGTTAGTTTCCAACTCCATTCTAAGAGGTTGTCTCCATCTGGTTGATTTGGCTGGAAGTGAGAGGGTTGACAAATCTGAGGCAGTTGGTGAGAGACTAAAGGAAGCTCAACATATAAATAGATCACTTTCTGCACTTGGCGATGTCATCTCTGCCTTGGCACAGAAGAGTCCACATATCCCTTACAGAAATAGCAAGCTCACACAAGTGTTACAAGATTCTTTAGGAGGGCATGCAAAAACATTGATGTTTGTTCATATAAATCCTGAACTTAATGCTTTTGGAGAGACAATTAGCACACTAAAGTTTGCTGAGAGGGTTTCATCCATTGAACTTGGGGCTGCTCAATCTAACAAAGAAACTGGTGAAATCCGAGAACTAAAGGAAGAGATATCAAATCTCAAATTGGCATTGGAGAGGAAGGAAGCAGAACTTGAGCAGTGGAAGGCTGGGAATGCTAGAAACGCCATTGATTCTCAAAAACCAAGAGCTGTTTCACCTTTTCAATTACCAAAATATGGTGCCAGTGGCAACACCAAGCATGAAACTGGTCAAAGACTTATGGATGATAGAAGCTTGGAGTCTAGAAGTTGCTCTTCAGGTAAGCAAAGAAGGTCAAGGTTTCCCTCAACATTAATGGAGAAGGACTCTATGCCAAAAATGTCTTTTCTGACTGAAGAAAAGTTAGTGAGCTCAGTGAAGGGAAGATCACCATCTCCTCCAGTGAGAAGATCACAATCCAATGATAGAGGGACAGTCATTAAAAGCAAAGTAAAAACTGAAACAATGGACAACCAACCAATATTAAAGCATCCATTTCCAGCTGCTAACAAATCCCTTGTCACAATGCCAGTGGTTGCATCCACTGACAATAACACAAGAATGTATGTGAGTTCACAAGAGACAGTAAAGCATGAAAACATTTCGGAAACTATCTTCAACCTCCAGAAGTTCAACTATAAGAAAGTTCATCAAGAACATGAAGAGGAACAATTCAAGCAAGCACTTAGTGCAGTAAGACAAGGTGGTATCAGAAAAAGCAAGGTTGAGAGTAAGGCTAAGGCCAAGCCTAATCAACTATCACCCTTCAAGATTCAAAAGCCTGATTTGACCTCACCATTCATTCCTGACATGGAATTTGCTAGTGAAAGTAATGTTGAGACACCTCCAAAGAATGATTACTCTGAGGCTGAAAATGATCTTAGATTTATGGAGTCTGCTGTCCACGGTGCTTTAAATCTCAAAAAGATACGTCAGAACTTTGCAAGGAATTTTCAGAACCTTGAATCAAGAGGAATTGTTCAAGCAGGAGAACATTTATTGGCTAGCAAAGTTGAAAACAAAGTTTTGAATGGTTCAGCCAGCAATCTTAAAGAAGGAAGCAATACATCCACGCCTGAATTTAGAAGAAGCAGATCTACCCCACGTGGAAAGTTTTTTGGTTTATCTTGA 3411 0.4093 MPQESCQNSFFTSPSKRGLKGLVVTTMNKEASCTVTEEGFNDNELAQRKAEEAARRRYKATEWLRQMDNVASLSLTATPSEEDFCLALRNGLILCNVLNKVNPGAVLKVVENPGLAVQCAEGAAHSAIQYFENMRNFLEAVKEMQLLTFEASDLEKGGSSNKVVDCILCLKGFYEWKLSGGVGVWRYGGTVRITSFPKKSPSSIVGSESADESLDESESSQYEQLLEFLQLSEEFLIEESRTANALAFLYDHFGLRLLQAYLREANGIEDLPLNAMVIDTLLSKVVKDFSSLLVSQGTQLGLFLKKILKGDMGCLSKREFIETISLYLNQRSSLASNDFSKFCNCGGKRDSIRQNGNYSAKYAEVINTQQKQLEGMKYFFEETKLEVKQIQSEWEEELSRLEDHIKSLEVASTSYHKVLEENRLLYNEVQDLKGAIRVYCRVRPFLPGQSNGQSTVDYIGENGDMMIINPLKHGKDARRVFSFDKVFGTTVTQEQIYADTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPDLTTEETWGVNYRALGDLFHISKERSDSIKYEVFVQMIEIYNEQVRDLLVSDGSNRRLDIRNNSQMNGINVPDAFLVPVTCTQDVLDLMRIGQKNRAVGATALNERSSRSHSVLTVHVRGRELVSNSILRGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNAFGETISTLKFAERVSSIELGAAQSNKETGEIRELKEEISNLKLALERKEAELEQWKAGNARNAIDSQKPRAVSPFQLPKYGASGNTKHETGQRLMDDRSLESRSCSSGKQRRSRFPSTLMEKDSMPKMSFLTEEKLVSSVKGRSPSPPVRRSQSNDRGTVIKSKVKTETMDNQPILKHPFPAANKSLVTMPVVASTDNNTRMYVSSQETVKHENISETIFNLQKFNYKKVHQEHEEEQFKQALSAVRQGGIRKSKVESKAKAKPNQLSPFKIQKPDLTSPFIPDMEFASESNVETPPKNDYSEAENDLRFMESAVHGALNLKKIRQNFARNFQNLESRGIVQAGEHLLASKVENKVLNGSASNLKEGSNTSTPEFRRSRSTPRGKFFGLS 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01007 1136 SMART ch_5 56 173 IPR001715 GO:0005515
Viun6g01007 1136 MobiDBLite consensus disorder prediction 836 854 - -
Viun6g01007 1136 MobiDBLite consensus disorder prediction 1107 1123 - -
Viun6g01007 1136 CDD KISc_C_terminal 433 765 - -
Viun6g01007 1136 PANTHER KINESIN-LIKE PROTEIN KLP-3 61 927 IPR027640 GO:0003777|GO:0007018
Viun6g01007 1136 Coils Coil 391 411 - -
Viun6g01007 1136 FunFam kinesin-like protein KIN-14F 430 804 - -
Viun6g01007 1136 ProSiteProfiles Kinesin motor domain profile. 435 763 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun6g01007 1136 Gene3D Kinesin motor domain 378 765 IPR036961 -
Viun6g01007 1136 SMART kinesin_4 433 771 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun6g01007 1136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 436 800 IPR027417 -
Viun6g01007 1136 Pfam Kinesin motor domain 441 763 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun6g01007 1136 Coils Coil 770 804 - -
Viun6g01007 1136 SUPERFAMILY Calponin-homology domain, CH-domain 48 202 IPR036872 -
Viun6g01007 1136 Gene3D - 46 174 IPR036872 -
Viun6g01007 1136 ProSiteProfiles Calponin homology (CH) domain profile. 54 175 IPR001715 GO:0005515
Viun6g01007 1136 PRINTS Kinesin heavy chain signature 664 682 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun6g01007 1136 PRINTS Kinesin heavy chain signature 713 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun6g01007 1136 PRINTS Kinesin heavy chain signature 510 531 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun6g01007 1136 PRINTS Kinesin heavy chain signature 633 650 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun6g01007 1136 CDD CH_AtKIN14-like 56 171 - -
Viun6g01007 1136 MobiDBLite consensus disorder prediction 807 904 - -
Viun6g01007 1136 FunFam kinesin-like protein KIN-14F 46 175 - -
Viun6g01007 1136 Pfam Calponin homology (CH) domain 56 175 IPR001715 GO:0005515
Viun6g01007 1136 MobiDBLite consensus disorder prediction 1107 1136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01007 Viun-Chr6 19501231 19512141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g01007 426 763 Calmodulin-binding Proteins AT5G65930 43.023 3.20e-75 270