Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00997 ATGCTCGCTACTAGTGCTGTTACTGCTTTGTCCCTATTACCACCAGTAAGAAGAGGTGGCCACCACAATGAGCAGAATGTTGTTACCTCATTGAGTTTACCAAGACGATCATGGACAACTAATAATTCAATATCTCCTAGTTGTGCACATTTTCCATTTGGTGCAAGAGCTCGCTCTCCTCAAACAGCAACTATAATATGTTCTGCAGCTTTGAATGCAAGATGTGGTGCAGAGCAAACCCAAACTGTTACTCGAGAAGCCCCTACAATTACTCATATTCCTGGAAAGGAGAAGTCACCACAGCTTGACGATGGAGGAACTGGATTTCCGCCTCGTGATGATGATGATGGTGGTGGTGGAGGCGGCGGAGGTGGAGGCAACTGGTCTGGTGGATTCTTCTTTTTTGGGTTTCTTGCTTTTCTTGGTTTCTTAAAGGATAAGGAAACTGAAGACACATACGGGGATGACCGAAGAAGGTGA 480 0.4542 MLATSAVTALSLLPPVRRGGHHNEQNVVTSLSLPRRSWTTNNSISPSCAHFPFGARARSPQTATIICSAALNARCGAEQTQTVTREAPTITHIPGKEKSPQLDDGGTGFPPRDDDDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKETEDTYGDDRRR 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00997 159 MobiDBLite consensus disorder prediction 79 124 - -
Viun6g00997 159 PANTHER PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIAL 4 159 IPR040299 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00997 Viun-Chr6 19438291 19441905 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00997 53 159 C2H2 Transcription Factor Family AT1G56200 67.890 2.34e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00997 - - gmx:100306022 184.882