Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00992 ATGGAAATTGGGAGAGAGGATGAGATTGTGGACATGCCCATGTCACCCCCAATAGTTGATTCCATTATTAACAATGAATGTTGTCACCACAGAGAGTTCATGTCTCAGACATATCTGCAGAATAAGTACTCAGAGATTGATATAGACACTGAAGATTCCAATTTTGATCAAAATCGCCCCCTCCCCATATTTCTCAAGTTTGAAGATGTGGAGTATAAGGTGAGAAATAGCCAAGCAGGCTCAGGTAACGTTGTGAAGTCAATGGTGTCAAAGGTAACCAAACACCTCACTGTGGAAGAAGATAGATACAAGAAAATTTTGAAGGGCATCACAGGAAGCATAGGCCCTGGTGAAATTCTTGCATTGATGGGTCCTTCTGGTAGTGGGAAGACAACCTTGTTGAGAGTTATAGGAGGAAGATTAGTTGAGAATGTAAAGGGAAAAGTAACTTACAATGATGTTCGTTTCAATCCAGCTCTCAAGAGGAGGATTGGGTTTGTGACACAAGAGGATGTGCTTTTCCCACAGTTAACAGTTGAAGAAACTTTAGTCTTCTCTGCACTTTTGAGGCTACCAGGCAGTATGAGCAAGCAGCAGAAGTATGCAAAAGTAGATACCACCATCAAGGAGCTAGGCCTAGAAAGATGTCGCCACACAAAAATAGCTGGAGGATATCTGAAAGGCATATCAGGAGGAGAAAGGAAGAGAACCTGCATAGGCTCTGAAATTCTTGTTGATCCTTCACTATTGCTACTTGATGAACCAACTTCTGGGCTTGATTCCTCCTCAGCAAACAAACTCCTTCTCACTCTTCAAGGACTTGCCAAGGCTGGAAGGACCATAATCACAACAATACACCAGCCATCGAGTAGAATCTTTCACATGTTTGACAAACTACTTCTGATATCAGAAGGCTATCCTGTTTACTATGGAAAAGCTAAGGAAACAATGGAGTACTTCTCATCTTTGAGATTCACCCCTCAAATACCGATGAATCCTGCAGAGTTCTTGCTTGACTTGGCAACTGGAGAAGTGAATGACATAAGTGTTCCACCAGATATCTTTCAAAATGAAGAATCTTCTGACCCATCAAAAATTGTTATTGAATATTTACAGCGCACATACAAATCTCTACTTGAGCCAAAAGAAAAAGAACAGAACCATAGAGTAGCAAGCACACCAGAACGCCTTCAACTAGCAATTCAGGTTAAGATGGAGTGGACATGTAGTTGGTTGGACCAATTTATGATTCTCTCCAAGAGAACATACAAAGCAAGAAGAAAGGAATACTTTGATAAGCTAAGAATAGTTCAAGCACTTGGGATTGCACTCTTGTTGGGGCTCCTTTGGTGGAAATCTTCAATCAATACTGAAGCTGGACTCAGAGATCAGGTTGGTTTAGCATTCTACATCTGTATATTCTGGACATCTTCATGCATTTTTGCAGCAGTCTATGTCTTTCCATTTGAAGAGTACTACTTGGTAAAAGAAAATAAAGCTGACATGTACAGATTAAGTGTATACTATGCATGTAGCACTCTATGTGACATGGTGGCCACCATTTTCTATCCTACTTTTTTCATGCTCATCTTGTACTTCATGGCTGGCTTTAACAGAGCTGTTGCTTCCTTCTTTTTGACACTATTAACCATTCTGTTAATAGCTATAACAAGTCAAGGGGCAGGCGAAATGTTTGGAGCTGCAGTTATGAGTGTTAAAAGAGCAGGTGCTGCTGCTACTTTGTTACTAATGTTATTCCTTCTCACAGGTGGCTACTATGTCCAGCACATACCAAAGTTCATGAGATGGTTGAAGTATTTATCCTTCATGTACTATGGTTTTAGGCTTCTTCTAAAAGTGCAGTATTCTGGAGACCAGTTATATGATTGTGGAAGCAAGGGAGGGTGCAGGACCCTGCAGAGTTCTCCAACATTTGACAGTGTAAACTTGAAGGGTGGATTGAAAGAAGTGTGGATTCTGCTAGCTATGGCATTAATCTTTCGGTTGTTGGCTTATTTGTGTCTTCGTGTAAGAATTGTTGGTAGAAAAAACTAA 2055 0.4058 MEIGREDEIVDMPMSPPIVDSIINNECCHHREFMSQTYLQNKYSEIDIDTEDSNFDQNRPLPIFLKFEDVEYKVRNSQAGSGNVVKSMVSKVTKHLTVEEDRYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVIGGRLVENVKGKVTYNDVRFNPALKRRIGFVTQEDVLFPQLTVEETLVFSALLRLPGSMSKQQKYAKVDTTIKELGLERCRHTKIAGGYLKGISGGERKRTCIGSEILVDPSLLLLDEPTSGLDSSSANKLLLTLQGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPVYYGKAKETMEYFSSLRFTPQIPMNPAEFLLDLATGEVNDISVPPDIFQNEESSDPSKIVIEYLQRTYKSLLEPKEKEQNHRVASTPERLQLAIQVKMEWTCSWLDQFMILSKRTYKARRKEYFDKLRIVQALGIALLLGLLWWKSSINTEAGLRDQVGLAFYICIFWTSSCIFAAVYVFPFEEYYLVKENKADMYRLSVYYACSTLCDMVATIFYPTFFMLILYFMAGFNRAVASFFLTLLTILLIAITSQGAGEMFGAAVMSVKRAGAAATLLLMLFLLTGGYYVQHIPKFMRWLKYLSFMYYGFRLLLKVQYSGDQLYDCGSKGGCRTLQSSPTFDSVNLKGGLKEVWILLAMALIFRLLAYLCLRVRIVGRKN 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00992 684 CDD ABCG_EPDR 94 311 - -
Viun6g00992 684 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 51 672 - -
Viun6g00992 684 Gene3D - 89 324 IPR027417 -
Viun6g00992 684 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 87 329 IPR003439 GO:0005524
Viun6g00992 684 SMART AAA_5 116 307 IPR003593 GO:0016887
Viun6g00992 684 Pfam ABC-2 type transporter 286 346 IPR043926 GO:0140359
Viun6g00992 684 Pfam ABC-2 type transporter 414 622 IPR013525 GO:0016020|GO:0140359
Viun6g00992 684 FunFam ABC transporter G family member 22 94 323 - -
Viun6g00992 684 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 322 IPR027417 -
Viun6g00992 684 Pfam ABC transporter 107 257 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00992 Viun-Chr6 19401140 19404519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00992 105 290 Calmodulin-binding Proteins AT2G36910 29.665 2.59e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00992 K05681 - gmx:100806094 1132.47