Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00924 ATGGCCGTGAACAATCGCTGTTTTGTGGAATGGAAAGAGCAATTTGTTTCACAGGAGCGTGGTAATCGTGTGGTTCACTATTACCTGAAGGATGCTGCTGGAGAATCTATCCTTGCAGTGGTTGGTACTGAGAGGAGTGTTAGGCACATGTGCTATGTTGTTGCTGAGGAGTTCCTTGAAATTTGTGGTAAGGAAGGTTCCATTCCAACTGGTTTCAAATGGAGATCTAGAAGAGAGGTGGTGGATTGGCTGACATCAACGCTATCAAAGCAGAACCTGCAGGGAGATAGAAGTGTATCACCTGGTCATAACTTGGTTCAAGCTCATGAGACCACAAATGATAGTATCAATGAAATTACTGGAGCACGAATAACAGATGATAAGGACTTTCCTATGAGTAACTCCAAATTATCCAATTCAGACATTGTTTGGTCAGGAGTTGCGTGGAGATGTGGCAAACAACTTAAGCATTTTCCTGCTTTTTGGAGGAATGGCATCAAAATAGAGATTCAATCCTTTGTTTTTGTTATGGGAAAGGGAGAGAATCATTATATTGCTTATGTAGAGGATATGTATGAAGACAGAAGGGGGCAGAAAAAGGTCAAGGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTGTAGTTCCTGTACGAAATCCTCACCCTCGAGAAGTTTTTATCACACCTTGTTCTCAAGTTATTAGTGCAGAGTGCGTAGATGGTCCTGCCACAGTCTTGACTCGTGAACACTATGAAAAGTGCATGTCTTTTTTTTCGCCCACTTCAAGGGACAGAACACATTTGTGCTTTAGGCAATTTAGAAGCAACAAAGTTAAGCCCTTTGACTTGAGTAAACTGCGTGGCTACTATGCCCAACCAATTCTTTCTTACTTGCACCTGGATTCAATTCAGAACCCTGAGAAGCTTGCAGGAGAAAATGAAGATTTGACTGCAGGTGATGATGTGAAGGTAGGAACCAAGAGGAGCAGAAGTGATAAGGGGTCACCTCAGTCTTGGATAAGTCAACAGGGAGTTAGGAAATTGATGAGAAGTAAGCAAATGATGGTATACAAAACCTTCCAGGTTGCAAATTATGCACGACCAGAAAGGAGACTGCTTTCTCGGAAGCAGGTTGAGTGTGAACCTTGGTCTATTCACAAATACAAGGTTGATGACAAGATTGAGTTGCTTTGTCAAGATAGTGGCATCAGAGGCTGCTGGTTCAGGTGTACAGTTGTTCAGGTAGCCCGGAAACAGCTGAAAGTCCAATATGAAGATGTCCAGGATGAAGATGGAAATGGAAATCTGGAGGAATGGGTGCCTGCTTTCAAGTGTGCCAGGCCTGATAAACTTGGGATGAGGCATTCTGGCCGGCCCACCATAAGACCTACTCCAACTCTTGAGGAACAAGAACTGGCTGTTGAGGTTGGACATGCAGTTGATGCATGGTGGAGTGACGGCTGGTGGGAAGGGGTTGTAACTAGAATTGATCACTGTGGAGATGAAAGTGTTCAAGTATACTTTCCTGGGGAATGCCTGTTGATGGAAGTGTGCAAGAAGGATTTAAGAATATCTAGAGATTGGTTAGGGGACAGTTGGATTAACATTAAGGCAAAACCTGAAATAACTACAACTATATTCTTCACTCCTAATAATAGCTTTAACACAAAGCTTTCTGTGTCCCCATCAATGGACAAAGTTGCGGACACTGTTGGTTTTGGTAATTTTTGTCATGGTGATCCTTTTAGTAAGAAGTGTGATGAAGTGGCTATTGAGGACCAGAAAAATGTGTCTTGTGAGGGCTTCACTGAAGATGGGGTCTCTGTCCCGGATAATAAACCCTCTTCAGAAAAAAACACTGAAGCTGATAATATTGAGATACATGGCTGTTGTGATGAGCATGACAAAGTTAACAGTGATGATGATAGTATGAAGAATGGAGATAATAATAATAATAATGGTAATAATAAAGATATGAAGGTGTTTGAAACTTCTGGATCGGACTGTGAACCTGTAGAAGTCATGGAAGTGGGTGTATAA 2043 0.4219 MAVNNRCFVEWKEQFVSQERGNRVVHYYLKDAAGESILAVVGTERSVRHMCYVVAEEFLEICGKEGSIPTGFKWRSRREVVDWLTSTLSKQNLQGDRSVSPGHNLVQAHETTNDSINEITGARITDDKDFPMSNSKLSNSDIVWSGVAWRCGKQLKHFPAFWRNGIKIEIQSFVFVMGKGENHYIAYVEDMYEDRRGQKKVKVRWFHHNQEVKGVVPVRNPHPREVFITPCSQVISAECVDGPATVLTREHYEKCMSFFSPTSRDRTHLCFRQFRSNKVKPFDLSKLRGYYAQPILSYLHLDSIQNPEKLAGENEDLTAGDDVKVGTKRSRSDKGSPQSWISQQGVRKLMRSKQMMVYKTFQVANYARPERRLLSRKQVECEPWSIHKYKVDDKIELLCQDSGIRGCWFRCTVVQVARKQLKVQYEDVQDEDGNGNLEEWVPAFKCARPDKLGMRHSGRPTIRPTPTLEEQELAVEVGHAVDAWWSDGWWEGVVTRIDHCGDESVQVYFPGECLLMEVCKKDLRISRDWLGDSWINIKAKPEITTTIFFTPNNSFNTKLSVSPSMDKVADTVGFGNFCHGDPFSKKCDEVAIEDQKNVSCEGFTEDGVSVPDNKPSSEKNTEADNIEIHGCCDEHDKVNSDDDSMKNGDNNNNNGNNKDMKVFETSGSDCEPVEVMEVGV 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00924 680 MobiDBLite consensus disorder prediction 312 339 - -
Viun6g00924 680 MobiDBLite consensus disorder prediction 617 644 - -
Viun6g00924 680 CDD Tudor_Agenet_AtDUF_rpt1_3 389 449 - -
Viun6g00924 680 Gene3D - 134 287 IPR043151 -
Viun6g00924 680 SMART agenet_At_2 473 531 IPR014002 -
Viun6g00924 680 SMART agenet_At_2 387 452 IPR014002 -
Viun6g00924 680 ProSiteProfiles BAH domain profile. 166 285 IPR001025 GO:0003682
Viun6g00924 680 MobiDBLite consensus disorder prediction 645 663 - -
Viun6g00924 680 MobiDBLite consensus disorder prediction 314 331 - -
Viun6g00924 680 SMART BAH_4 166 285 IPR001025 GO:0003682
Viun6g00924 680 Pfam Agenet domain 392 466 IPR008395 -
Viun6g00924 680 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 388 659 - -
Viun6g00924 680 MobiDBLite consensus disorder prediction 603 672 - -
Viun6g00924 680 Pfam BAH domain 171 276 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00924 Viun-Chr6 18923838 18929279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00924 401 529 PHD Transcription Factor Family AT5G58610 31.343 6.73e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00924 - - gmx:100306240 1150.96