Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00903 ATGTCAGAGATTGTGGAACCTTCACCGACTACAGGATCCCTTTTTATGCTTCATCAAACAGCGCATGCTTCTGTGACTTCTGCTGCATCTGCTTCATTTCCTGTAACCACTGCAAGCTTCAATACCAATACTGTTGATGACCGGAAACCCAGCTTCTTTGAGTTTAAACCGCACAGTAGACCAAATATGGTTCCTGCAGACCCCGACAATCACGCAAGTGAAAAATCTACTCAAATAGATGGTGAAGGAAAAGCTCAACCTTTTGATTCATCATCACCATTAGTAAAAAGTGAGATAGCGGTCCCTTCAAATGAATTAAGTCTATCATCTCCTGTTCAAATTGTTAGCTCGGGAGCTAATGCCCGTGTTGAAGGTGATTTGGATGAACTGAACCCTAGGAGCAACATAGCAACTGGGCTTCAACCATCACAAGTTGACAATAGAGGTAGTGGACTTTCCGTCACAGCTGAGCGAGTATCTGATGATGGATACAACTGGAGAAAGTATGGGCAGAAACATGTTAAAGGAAGTGAATTTCCACGCAGTTATTACAAATGTACACATCCTAACTGTGAAGTTAAGAAACTATTTGAACGATCTCATGATGGGCAAATCACTGAGATAATTTACAAGGGGACACATGATCATCCGAAACCCCAGCCAAACCGGCGTTACTCAAGTGGAACTATCATGACTATGCAAGAAGAGAGGACTGATAAAGCTTCCTTTCGAGATGACAAAGGATCCAATATATGTGGCCAGGTGTCTCACCCAGCTGAGCCTGACAGTACTCCAGAGTTATCACCTGCAGCAACAAATGATGGTGATCCAGAGGGTACAGGATTTTTTTCAAATCGGAATAGTGATGAGGTTGATGATGATGATCCCTTATCAAAGCGAAGAAAAATGGAGTTTGCAAATGCTGACATTACTCCTGTAGTTAAGCCTATTAGGGAGCCACGGGTCGTTGTACAAACTCTGAGTGAGGTTGATATATTGGATGATGGTTACCGCTGGCGCAAGTATGGGCAAAAGGTGGTGAGAGGCAATCCTAACCCTAGAAGCTATTACAAATGCACAAACACGGGGTGCCCCGTTAGGAAACATGTGGAGAGGGCTTCTCATGATCCAAAAGCTGTGATAACCACATATGAGGGGAAACACAATCATGATGTGCCAACTGCAAGGAATAATAGCTGCCATGACATTGCAGGATCAGCAAGTGGTGGTGGACACACAAGAATTAGGGCAGAAGAAAGTGATACCATCAGCCTTGACCTTGGTATGGGAATCAGCCCTGCTTCGGAAAACACGCCAAACAGCCAAGGGAGAATGATGCTTCCTGAATTTGGGGACAACCATGCTCATACCAGCAACTCCAATTTCAAGTTTGTTCATACTTCAGGGGCACCTGTGTACTTTGGTGTTCTGAATAACAACTCTAACCCATATGGCTCTAGAGAAAATCCAAGTGATAGTAGTACATCTTTAAACCATTCTGCATATCCCTGCCCTCAGAACGTGGGAAGAATACTAATGGGTCCTTAA 1548 0.4386 MSEIVEPSPTTGSLFMLHQTAHASVTSAASASFPVTTASFNTNTVDDRKPSFFEFKPHSRPNMVPADPDNHASEKSTQIDGEGKAQPFDSSSPLVKSEIAVPSNELSLSSPVQIVSSGANARVEGDLDELNPRSNIATGLQPSQVDNRGSGLSVTAERVSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPNRRYSSGTIMTMQEERTDKASFRDDKGSNICGQVSHPAEPDSTPELSPAATNDGDPEGTGFFSNRNSDEVDDDDPLSKRRKMEFANADITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNTGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARNNSCHDIAGSASGGGHTRIRAEESDTISLDLGMGISPASENTPNSQGRMMLPEFGDNHAHTSNSNFKFVHTSGAPVYFGVLNNNSNPYGSRENPSDSSTSLNHSAYPCPQNVGRILMGP 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00903 515 FunFam WRKY transcription factor 33 320 386 - -
Viun6g00903 515 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 76 432 IPR044810 GO:0003700
Viun6g00903 515 MobiDBLite consensus disorder prediction 210 229 - -
Viun6g00903 515 MobiDBLite consensus disorder prediction 43 95 - -
Viun6g00903 515 SMART WRKY_cls 160 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun6g00903 515 SMART WRKY_cls 333 392 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun6g00903 515 SUPERFAMILY WRKY DNA-binding domain 157 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun6g00903 515 ProSiteProfiles WRKY domain profile. 328 393 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun6g00903 515 MobiDBLite consensus disorder prediction 79 95 - -
Viun6g00903 515 MobiDBLite consensus disorder prediction 238 300 - -
Viun6g00903 515 SUPERFAMILY WRKY DNA-binding domain 325 393 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun6g00903 515 FunFam WRKY transcription factor 150 220 - -
Viun6g00903 515 Pfam WRKY DNA -binding domain 161 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun6g00903 515 Pfam WRKY DNA -binding domain 334 390 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun6g00903 515 Gene3D WRKY domain 152 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun6g00903 515 Gene3D WRKY domain 318 394 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun6g00903 515 ProSiteProfiles WRKY domain profile. 155 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun6g00903 515 MobiDBLite consensus disorder prediction 483 503 - -
Viun6g00903 515 MobiDBLite consensus disorder prediction 483 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00903 Viun-Chr6 18762831 18767196 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00903 6 515 WRKY Transcription Factor Family AT4G26640 54.721 2.54e-164 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun6g00903 WRKY 1.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00903 - - gmx:100781491 871.307