Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00881 ATGGCAGAAACTGCAGTGTCTTTTGCTAGTCAGCATGTGCTTCCAAAACTTTTGGAAACCGTAAAGATGCTGCGAGATCTCCCAAAAGAAGTTGAAGAAGTTACGGATGAACTAAAAAGCTTTGAAGTTTACATCAATATTGATGCAAATAGAGTGGCTGAAGCTGAAAAAGATCGCGATACGAGCGAAAGAATAAGGAAAAGGTTGATGAGGCTGAGAGAAGCGGCTTTTCGCATGGAAAATGTCATCGATGACTATGTGATGATATGTGACGCAAATCAACCTGAAGAAGGTCCTCGATGTGCAGCTTTACTCTGTGAGGCTGTTGAGTTCATCAAAACTCAAATCCACCGCCTTCAAATAGCGTATCAGATTCAGGATGTTAAGTCACTTGTTCGAGTGGAAAGAGATGGCTTCAAAAAGGATTTTCCTACAGAACCAATATCAAATGGTTCTAGCGGAAATGAAAATTTCACATGGCATAAACTTCGAATGGATCCTCTCTTTTTTAAGCAAGATGAGGTTGTTGGCTTTGAAGGCCCAATACAAACACTGAAAAAGTGGTTGACAGAGGGAAGAAAAGAACGCACTGTCATCTCTATTGTAGGAATGGCAGGATTGGGAAAAACCACTCTTGGTAAGCAAGTTTTTGACACGGTAGATAAACACTTTGAGTGCCATGCAGTGGTCACAGTGTCCCGACCCTATGATGTTTTACGGTTTCTGAGAGAACTGACGAAGAAGCTTTACAGAGAAAGTAAGGAGGAACCTCCTCGGGATGTTGCAACTATGGATCGAATGTCGTTGATAGAAGAAATCAGAAACCGCTTGTGCAATAAGAGGTATGTCGTCTTCTTTGATGATGTATGGGAGGAAAAATTTTGGGATGATATTGAATCGGCTCTAATTGATAACAAAAACGGAAGTAGGATATTAATCACTACCCGGGTTGAGAAGGTTGTGGACTTCTGTAAGAAATGTTTATTTTTTGAGGTGCATAAGATAAAACCTTTAAGTAAAGAAAAATCACTGGAATTGTTATGGAGGAAGGCATTTGGGTATGATTTTGATGAGCGTTGTACAAAAGATTATAAAGAAGTAGGTCTGGACATTGTTAGAAAGTGTGAGTGTTTACCTTTAGCAATTGTAGCCATTGGTAGTCTTTTAAGCACAAAACCTAAAAGTCCATCTGAATGGGGCCGGTTTAGTAAAAATCTAGAAAGCAACCCCGAGTTAGACAGTGTAAAAAAAATTTTGAGTTTGAGTTACGATGATTTGCCACAGAATCTGAGGTCATGTTTGTTGTATTTTGGAATGTATCCTGAAGATTGCACAGTTAAATCTGGTAGATTAATTCAGCAATGGATAGCTGAAGGGTTTATCAGATATGAAAATGGAAAAACTTTAAAAGAAGTTGCAGAAAAATATTTAATGGAGTTGATTAATAGAAGCTTGGTGCAAGTATCATCATTTAGCACAGGTGACAGAGCCAAAGAATGTCGTGTTCATGACTCAATACATGAAATGATTCGTGAAAAAATGAAGAATACAGGGTTTTGTGAGCATAGTGATGATGAGCATAATCAGTCGGAGTCAAGTGGTATCATTCGACGCTTAACAATAGCAAAAAGTTCATACGATTTAAGTGGACCTAGTGAAGGATCTCAGTATGTTCGGTCAATTCTAATTTTGACGAAGGAAGTCTTATCTGAACAATTCAGCAGGGCCTTGCTTGCAAAATACACGCGGTTGAAGGTGCTTGACTTTGGATATGCTAGATTAACAGAAATCCCTGAAAATTTGGGGAGTTTAATCCACTTGAAGTATCTAAGCTTCCAGAGTACATCTATAAGCAGTCTTCCAAAATCCATTGGTAATCTACAGAACTTGGAGACCTTGGATATTCGAACAGGAATGAGGATTGAGCTGCCAAAAGAGATTACGAAGCTCAGAAAGCTACGTTGTCTTTTGGGTAAACCACTATCTTCCATTTCAGTGAAGGATAGTCTTGGAAGCATTACATCCCTGGAAAAGATGCATGTATTGTTAATAGATCCAGATGGAGTGGTGGTTAGAGAGCTAGCAAAGCTAACGAAATTAAGTGATTTGAGGGTTTCTGATGTTAAGGGTGATCATGCCAACACTCTATGTGCCTCAATAAACGAGATGCCACTCTTGGAGCGATTACATATCTCCTTAAATTATGGTGCTCGAGAAATTGACTTGCACATTAGCTCATCCTTGTCTGAACTAAAGAAGCTCCACCTGTGTGCCAATTTAAAAGAGTTCCCAAATTGGATTCTATCGCTCGAAAATCTTTTGAAATTGTCTTTGGTTGATTCCAGGTTAACTAACATTCCTTTGATATCTCTGGGAAATATGCCAAATTTGTTGATCCTCTCTTTTGGCCCCCGTTCTTTTGAAGGAGAAACTCTGCATTTTCAAAATGGAGGATTTCGGAAGCTAAAGGAACTAAAGCTCAAACGTTTGTATCAATTGAGTTCCATCTTTATTGATAGCGGAGCTCTGCAATCTTTGGAAAAGCTCGAGATATTTTCTATTCCACAACTGAAGACAGTACCCTCTGGTATTCAACACTTAGAGAAACTCCAAGTTCTCGACATCTTGCGTATGCCCACAGAATTTCAACAGAGCATTGACCCCAATGGAGGGGAAGACCACTGGATGATCAAACATGTGCCCCATCTACATTTTGTCACCAAAAATCGTGGTTTGCTAAAGATCCAGGAACTAGCTAACATTTTAGCTTCGCAGAGAAAAATGAAGCAGATAATGTAG 2799 0.3923 MAETAVSFASQHVLPKLLETVKMLRDLPKEVEEVTDELKSFEVYINIDANRVAEAEKDRDTSERIRKRLMRLREAAFRMENVIDDYVMICDANQPEEGPRCAALLCEAVEFIKTQIHRLQIAYQIQDVKSLVRVERDGFKKDFPTEPISNGSSGNENFTWHKLRMDPLFFKQDEVVGFEGPIQTLKKWLTEGRKERTVISIVGMAGLGKTTLGKQVFDTVDKHFECHAVVTVSRPYDVLRFLRELTKKLYRESKEEPPRDVATMDRMSLIEEIRNRLCNKRYVVFFDDVWEEKFWDDIESALIDNKNGSRILITTRVEKVVDFCKKCLFFEVHKIKPLSKEKSLELLWRKAFGYDFDERCTKDYKEVGLDIVRKCECLPLAIVAIGSLLSTKPKSPSEWGRFSKNLESNPELDSVKKILSLSYDDLPQNLRSCLLYFGMYPEDCTVKSGRLIQQWIAEGFIRYENGKTLKEVAEKYLMELINRSLVQVSSFSTGDRAKECRVHDSIHEMIREKMKNTGFCEHSDDEHNQSESSGIIRRLTIAKSSYDLSGPSEGSQYVRSILILTKEVLSEQFSRALLAKYTRLKVLDFGYARLTEIPENLGSLIHLKYLSFQSTSISSLPKSIGNLQNLETLDIRTGMRIELPKEITKLRKLRCLLGKPLSSISVKDSLGSITSLEKMHVLLIDPDGVVVRELAKLTKLSDLRVSDVKGDHANTLCASINEMPLLERLHISLNYGAREIDLHISSSLSELKKLHLCANLKEFPNWILSLENLLKLSLVDSRLTNIPLISLGNMPNLLILSFGPRSFEGETLHFQNGGFRKLKELKLKRLYQLSSIFIDSGALQSLEKLEIFSIPQLKTVPSGIQHLEKLQVLDILRMPTEFQQSIDPNGGEDHWMIKHVPHLHFVTKNRGLLKIQELANILASQRKMKQIM 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00881 932 Gene3D - 165 329 IPR027417 -
Viun6g00881 932 FunFam Probable disease resistance protein At1g61300 161 326 - -
Viun6g00881 932 FunFam Probable disease resistance protein At1g63360 423 512 - -
Viun6g00881 932 PANTHER DISEASE RESISTANCE PROTEIN RP 62 833 IPR044974 GO:0006952
Viun6g00881 932 SUPERFAMILY L domain-like 501 882 - -
Viun6g00881 932 PRINTS Disease resistance protein signature 276 290 - -
Viun6g00881 932 PRINTS Disease resistance protein signature 375 389 - -
Viun6g00881 932 PRINTS Disease resistance protein signature 198 213 - -
Viun6g00881 932 PRINTS Disease resistance protein signature 625 641 - -
Viun6g00881 932 Gene3D - 337 422 IPR042197 -
Viun6g00881 932 Pfam Rx N-terminal domain 5 88 IPR041118 -
Viun6g00881 932 Pfam NB-ARC domain 180 424 IPR002182 GO:0043531
Viun6g00881 932 Gene3D Ribonuclease Inhibitor 689 887 IPR032675 -
Viun6g00881 932 Gene3D Ribonuclease Inhibitor 563 685 IPR032675 -
Viun6g00881 932 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 437 IPR027417 -
Viun6g00881 932 Gene3D - 423 514 IPR036388 -
Viun6g00881 932 Gene3D - 4 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00881 Viun-Chr6 18549968 18554219 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00881 174 426 WRKY Transcription Factor Family AT5G45050 25.483 1.22e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00881 K13457 - gmx:100806153 976.852