Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00871 ATGGCAGAAACTGCGGCGTCTTTTGCTAGTCGGCATGTGTTTCCAAAATTTTTGGAAGCCGTAAAGATGCTGAGAGATCTCCCAAAAGAAGTTGTAGAAGTTGCCGATGAGCTAGAAAGCTTTCAAGATTTCATCCATGATGCAAATAAAGTGGCTGAAGCAGAAGAAGATAAAAATAGGCGTGATAGAATAAGAAAAAGGTTGATGAGGCTAAGAGAAGCAGCTTTTCGCATGGAAGATGCCATCGATGACTATGTCATATGTGACGACGAGAAGCAACCTGAAGAAGATCCTCGATGTGCAACTTTACTATGTGAGGCTGTTGAGTTCATCAAAACTCAAATCCTTCGCCTTCAAGTGGCGTATCAAATTCAGGATGTTAAATCGCTTGTTCGTGCGGAAAGAAATGGGTTTGAAAACCATTTTCCTATAGGATCAAGATCGAACGGTTCTAGAGGAAATGAAAATTTCACATGGCATAAACTTCGAATGGATCCTCTCTTTATTAAGGAAGAGGAGGTTGTTGGCTTTGAAGGCCCTATACATGCATTGAAAAAGTGGTTGACAGAAGGACAAGAAGAACGCACTGTTATCTCTATTGTAGGAATGGCAGGATTGGGAAAAACCACACTTTCTAAGCAAGTTTTTGACAGGGTACATACAGACTTTGAGTGCCATGCGTTGATCACAGTGTCTCGATCCTACACTGTTGAAGGGTTGCTAAGGGATTTGACGAACAAGCTCTGCAAAGAGAGAATGGAGGATCCTCCTCGGGATGTTGCAACTATGAATCAAATGTCGTTGATAGAAGAAGTCAGAAACCGCCTTCACAATAAGACGTATGTTGTCTTGTTTGATGACGTATGGAATGAAACATTTTGGGATGACATTGAATTGGCTCTAATTAATAATAAAAATGGAAGTAGGATACTAATCACTACCCGGGATGAGAAGGTTGCGGAGTACTGTAAGAAAGCTTTATTTTTTGAGGTGCATAAGCTACAACCTTTAAGTAAAGAGAAATCACTGGAGCTATTATGTAAGAAGGCATTTGGGTATGGTTTTGATGGATGTTGTCCAAAAGATTATGAAGAAGTAGGTCTCGACATTGTTAGAAAGTGTGAGTGTTTACCTTTAGCAATTGTGGCTATTGGTAGTCTTTTATATAGAAAATGTAAAACTCCACCGGAATGGCGTCGGTTTAGTCAAAATCTAAGTTCGGAGTTGGAGAGCAATTCCGAGTTACACAGTGTAACAAAAATTTTAAGTTTGAGTTTCGATGATTTGCCACAAAATCTGAGGTCATGTTTGTTGTATTTCGGAATGTATCCTGATGATTACGAAGTTAAATGTGGTAGATTAATTCAGCAGTGGATAGCTGAAGGGTTTGTCAAACAAGAAAGTGGAAGAAATTTGGAAGAAGTTGCACAACAACATTTAATGGAATTGGTGAGTAGAAGCTTAGTTCTTGTATCATCATTTACCAAAGATGACAAGGCTAGAGCATGCCGTGTTCACGACTCAATACACGAAATGATCCGTGGAAAGATGAAGAATACGGGGTTTGGTGAGTATATTGATGAGGATAATCATTTGGAATCAAGCGGTATCGTTAGACGCTTAACAATAGCAACAAATTCCAATGACTTAAATGGATCTATGGAAGAATCACAACATGTTCGGTCAATTATAATTTTCAGAAGGAGGGATGTAAAATTCACAGACCGCTTGCTTGCAAAATACAGACGGTTAAAGGTGCTTGATTTTGGGTATGCTCCCTTATATGATGTTCCTGAAAATTTTGGGAGTTTAATCCACTTAAAGTATCTACGCTTACGGAATATAATGATAAGAAGCCTTCCAAAATCCATTGGTAAGCTGAAGAATTTGGAGATCTTAGATGTACGAACACATAGGGTGATAGAGGTACCAAAGGAGATTACGAAGCTTAGAAAGCTACGTCATCTTTTGGGTAGCCCTATATCTTCCGTTGCAGTGAAGGATAGTCTTGGAAGCATGACATCCCTGGAAAAGATGCATGTATTGATAGTAGATGAAGATGGAGTGGTGATTAGAGAGCTTGGAAAGCTAAAGCAATTAAGGAATCTTAGGCTTTCTAATGTTATGGGAAATCATTCTGATACTCTTTCTTTCTCAATAAACCAGATGCAACTCTTGGAGCGACTAGATATCTCCGTCCAATATCTGAGTGAAGTAATTGACTTGCACATCACGCCATCCTTGTCCAAAATAAGGAAGCTTCACCTCTATGGCAATTTAAAAGAGTTCCCAAGTTGGATTCCGCGACTCCAAAATCTTGTGAAATTGTCTTTGGTTGAATCCAGGTTAACTAACATTCCATTGAAATCTCTCGGAAATATGCCAAATTTGTTGTTCATCTCTTTCGACTACAATTCTTATGAAGGAGACACTTTATATTTTGAAAATGGAGGATTTCAGAAACTAAAGGAACTAGAGCTCAAATGTTTGGATAATTTGAGTTCTATCTTTATTGATATCGGGGCACTGCAATCCTTGGAAAAGCTTAAGATAATGACTATTCCACAATTGAAGAGAGTACCCTCTGGCATTCAAAACTTAAAGAAACTCCAAGTTCTCGATATCTTATATATGCCGAGAGAATTTCAAAAGAGGATTGACCCCAATGGAGGAGAAGAGCACTGGATGATCAAACACGTGCCTCATATACATTTTGTCATGAAAGATCGTGGTTTGCTAATGGTCCACAAAGTAGCTCAAATTTTATCTTCGCGTTTACAGAGAAAAAAAGCAACTGTGCAGTTTGAAGCGGATAATGAAACACAAATAAAACGGATAACGTAG 2844 0.3868 MAETAASFASRHVFPKFLEAVKMLRDLPKEVVEVADELESFQDFIHDANKVAEAEEDKNRRDRIRKRLMRLREAAFRMEDAIDDYVICDDEKQPEEDPRCATLLCEAVEFIKTQILRLQVAYQIQDVKSLVRAERNGFENHFPIGSRSNGSRGNENFTWHKLRMDPLFIKEEEVVGFEGPIHALKKWLTEGQEERTVISIVGMAGLGKTTLSKQVFDRVHTDFECHALITVSRSYTVEGLLRDLTNKLCKERMEDPPRDVATMNQMSLIEEVRNRLHNKTYVVLFDDVWNETFWDDIELALINNKNGSRILITTRDEKVAEYCKKALFFEVHKLQPLSKEKSLELLCKKAFGYGFDGCCPKDYEEVGLDIVRKCECLPLAIVAIGSLLYRKCKTPPEWRRFSQNLSSELESNSELHSVTKILSLSFDDLPQNLRSCLLYFGMYPDDYEVKCGRLIQQWIAEGFVKQESGRNLEEVAQQHLMELVSRSLVLVSSFTKDDKARACRVHDSIHEMIRGKMKNTGFGEYIDEDNHLESSGIVRRLTIATNSNDLNGSMEESQHVRSIIIFRRRDVKFTDRLLAKYRRLKVLDFGYAPLYDVPENFGSLIHLKYLRLRNIMIRSLPKSIGKLKNLEILDVRTHRVIEVPKEITKLRKLRHLLGSPISSVAVKDSLGSMTSLEKMHVLIVDEDGVVIRELGKLKQLRNLRLSNVMGNHSDTLSFSINQMQLLERLDISVQYLSEVIDLHITPSLSKIRKLHLYGNLKEFPSWIPRLQNLVKLSLVESRLTNIPLKSLGNMPNLLFISFDYNSYEGDTLYFENGGFQKLKELELKCLDNLSSIFIDIGALQSLEKLKIMTIPQLKRVPSGIQNLKKLQVLDILYMPREFQKRIDPNGGEEHWMIKHVPHIHFVMKDRGLLMVHKVAQILSSRLQRKKATVQFEADNETQIKRIT 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00871 947 PRINTS Disease resistance protein signature 275 289 - -
Viun6g00871 947 PRINTS Disease resistance protein signature 625 641 - -
Viun6g00871 947 PRINTS Disease resistance protein signature 197 212 - -
Viun6g00871 947 PRINTS Disease resistance protein signature 374 388 - -
Viun6g00871 947 Gene3D - 7 121 - -
Viun6g00871 947 PANTHER DISEASE RESISTANCE PROTEIN RP 33 833 IPR044974 GO:0006952
Viun6g00871 947 FunFam Probable disease resistance protein At1g63360 426 514 - -
Viun6g00871 947 Gene3D - 164 328 IPR027417 -
Viun6g00871 947 Pfam Rx N-terminal domain 8 94 IPR041118 -
Viun6g00871 947 Gene3D Ribonuclease Inhibitor 542 887 IPR032675 -
Viun6g00871 947 Gene3D - 336 425 IPR042197 -
Viun6g00871 947 FunFam Probable disease resistance protein At1g61300 161 326 - -
Viun6g00871 947 Pfam NB-ARC domain 179 428 IPR002182 GO:0043531
Viun6g00871 947 Gene3D - 426 517 IPR036388 -
Viun6g00871 947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 440 IPR027417 -
Viun6g00871 947 SUPERFAMILY L domain-like 504 882 - -
Viun6g00871 947 Coils Coil 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00871 Viun-Chr6 18484709 18488676 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00871 173 397 WRKY Transcription Factor Family AT5G45050 26.991 2.11e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00871 K13457 - gmx:100806153 1041.18