Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00868 ATGACAGAAACTGTAGTGTCTTTTGCGAGTCAGCATTTGCTTTCAAAATTTTTGGATGCTGTGAAGATGGTGAGAGATCTCCCAAAAGAAGTTGCAGAAGTTACAGATGAACTAGAAAGCTTTCAAGATTTCATCCATGACGCAAATAAAGTGGCTGAAGCTGAAGAAGATAACAATAAACGGGATAGAATAAGAAAAAGGTTGACGAGGCTGACAGAAGCTGCCTTTCGCATGGAAGATGTAATCGATGACTATGTGTTATGTGACAATAAGCAACCTGAAGAAGATCCTCGATGTGCAGATTTACTCTGTGAGGCTGTTCAGATCATCAAAACTCAAATCCTTCGCCTTCAAATAGCGTATCAGATTCAGGACGTTAAATCAGTTGTTCGAGGGGAAAAAGATGCCTTCCAAAAACATTTTCCAATAGAACCAAGATCAGACGGCTCTAGAGAAAACGAAAATTTCACATGGCATAAACTTCGAGTGGATCCTCTCTTTAAGCAAGATGAGGAGGTTGTTGGGCTTGAAGGCCCTATACAAACACTAAAAAAGGGGTTGACAGAGGGGAGAGAAGAACGCACTGTCATCTCTATTGTAGGAATGGCAGGATTGGGTAAAACCACTCTTTCTAAGCAAGTTTTTGACAGGGTCCATAAACACTTTGAGTGTCATGCACTGATCACAGTGTCTCGACCCTATACAGTTGAACGGTTGCTGAGGGATCTGACAAAGGAGCTTTGCGAAGAAAGAAATGAGCAGCCTCCTCAGGATGTTGAAACTATGAATCAAATGTCCTTGATAAAAGAAGTCAGAAAACGCTTGTGCAATAAGAGGTATGTTGTCTTGTTTGATGACGTATGGAATGAAAAATTTTGGGATGACATTGAATTAGCTCTAATTGATAATAAAAATGGAAGTAGGATACTAATCACTACCCGGGATGAGAGGGTTGTGGAGTTCTGTAAAAAAGCTTTATCTTTTGAGGTGCATAAGCTACAACCTTTAAGTAAAGAAAAATCATTGGAGTTGTTATGTAGGAGGGCATTTGGGTATGATTTTGATGGACGTTGTCCAGAAGATTATGAAGAAGTAGGTCTAGACATAGTTAGGAAGTGTGAGTGTTTACCTTTAGCAATTGTGGCCATTGGTAGTCTTTTATATAGAAAATGTAAAAGTTCATCAGAATGGCACCTGTTTAGTCAAAATCTAAGTTCGGAGTTGCAGGGCAATTCTGAGTTACACAGTGTAACAAAAATTTTAAGTTTGAGTTATGATGCTTTGCCACAAAATTTGAGGTCATGTTTGTTGTATTTCGGAATGTATCCTGAAGATTACGAAGTTAAATGTGATAGATTAATTTGGCAGTGGATAGCTGAAGGGTTTGTCAAACATGAAAGTAGAAAAAACTTAGAAGAAGTTGCACAACAATATTTAATGGAATTGATTAGTAGAAGCTTGGTGCTAGTATCATCATTTAGCACAGATGGGAAAGTGAAAGCATGTCGTGTTCATGACTCAATGCATGAAATGATCCGTCTAAAAATTAAGAATACAGAGTTTTGTGAGTATATTGACGAGCATAATCATTTGGAGCCAAGTGGTACCATTCGACGCTTAGCAATAGCAACGAGTTCCAATGGTTTAATTGGATCTATTGAAGAATCACAACATGTTCGGTCAATTTTATTTTTCACTAATAAAGTGTTGTCTGAAGACTTCACTATCCGCTTGCTTGCGATTGCGAAATACATGCGGTTGAAGGTGCTCGATTTTGAATTTGCTCCCTTATATAATGTTCCTGAAAGTTTGGGAAGTTTAATCAACTTAAAGTATCTAAGCTTCCGGGATACATACATTAGAAGTCTTCCAAAATCCATTTGTAAGCTGCAGAACTTGGAGACCTTAGATGTACGAGCAAATAGGGAGATTGCGATGCAGAACTTGGAGATCTTAGATGTACGAGCAAATAGGGAGATTGAGGTACCAAAGGAGATTACCAAGCTGAGAAAGCTACGTTGTTTTTTGGGTAACCGAATATCTTCCATTGCATTGAAGGATAGCCTTGGGAGCATAACATCCCTGGAAAAGATGCATGTACTAGAAATAGATCCAGATGGAGAGGTGATTAGAGAGATTGGAAAGCTAAAGCAACTAAGGGATCTGAGGGTTGTTAGTCTTAGGGGAGATGATGCTGACACTCTTTGTTCCTCAATAAACGAGATGCCACTCTTGGAGCGACTGCATATCTCCACAAAATATGGGACTGAAGCAATTGACTTGCAGATTAGGTCATCCTTGTCTAAACTAAGGAAGCTTCACCTGTATGGCAATTTAAAAGAGTTCCCAATTTGGATACCGCGGCTCCAGAATCTTGTGAAATTGTCTTTGGTTCAATCCCGGTTAACTAACATTCCATTGATATCTCTGGGAAATATGCCAAATGTGTTGATCCTCTCTTTAAGTTTGAATTCTTATGAAGGAGAAACTTTACATTTTCAAAAGGGAGGATTTCAGAAACTAAAGGAACTAGAGCTCCAACGTTTGCATCAATTGAGCTCCATCTTTATTGATAGCGGAACACTGCAATCTTTGGAAAAGCTTCTGATAATAAATATTCCCAAACTGAAGACAGTACCCTCTGGCATTCAACACTTAAAGAAACTCCGACTTCTCCACATGTTATATATGCCGTCTGAATTTAAACAGAGGATTGACCCCAATGGAGGAAAGGAGCATTGGATGATCAAACATGTGCCCGATGTACGGTTTGTCCCTTTGCTATTGGCCGAGGGATTTGCCAAAATGTTTTCTTTGCGGTTGTAG 2826 0.391 MTETVVSFASQHLLSKFLDAVKMVRDLPKEVAEVTDELESFQDFIHDANKVAEAEEDNNKRDRIRKRLTRLTEAAFRMEDVIDDYVLCDNKQPEEDPRCADLLCEAVQIIKTQILRLQIAYQIQDVKSVVRGEKDAFQKHFPIEPRSDGSRENENFTWHKLRVDPLFKQDEEVVGLEGPIQTLKKGLTEGREERTVISIVGMAGLGKTTLSKQVFDRVHKHFECHALITVSRPYTVERLLRDLTKELCEERNEQPPQDVETMNQMSLIKEVRKRLCNKRYVVLFDDVWNEKFWDDIELALIDNKNGSRILITTRDERVVEFCKKALSFEVHKLQPLSKEKSLELLCRRAFGYDFDGRCPEDYEEVGLDIVRKCECLPLAIVAIGSLLYRKCKSSSEWHLFSQNLSSELQGNSELHSVTKILSLSYDALPQNLRSCLLYFGMYPEDYEVKCDRLIWQWIAEGFVKHESRKNLEEVAQQYLMELISRSLVLVSSFSTDGKVKACRVHDSMHEMIRLKIKNTEFCEYIDEHNHLEPSGTIRRLAIATSSNGLIGSIEESQHVRSILFFTNKVLSEDFTIRLLAIAKYMRLKVLDFEFAPLYNVPESLGSLINLKYLSFRDTYIRSLPKSICKLQNLETLDVRANREIAMQNLEILDVRANREIEVPKEITKLRKLRCFLGNRISSIALKDSLGSITSLEKMHVLEIDPDGEVIREIGKLKQLRDLRVVSLRGDDADTLCSSINEMPLLERLHISTKYGTEAIDLQIRSSLSKLRKLHLYGNLKEFPIWIPRLQNLVKLSLVQSRLTNIPLISLGNMPNVLILSLSLNSYEGETLHFQKGGFQKLKELELQRLHQLSSIFIDSGTLQSLEKLLIINIPKLKTVPSGIQHLKKLRLLHMLYMPSEFKQRIDPNGGKEHWMIKHVPDVRFVPLLLAEGFAKMFSLRL 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00868 941 Gene3D - 425 511 IPR036388 -
Viun6g00868 941 Pfam NB-ARC domain 178 426 IPR002182 GO:0043531
Viun6g00868 941 PRINTS Disease resistance protein signature 628 644 - -
Viun6g00868 941 PRINTS Disease resistance protein signature 196 211 - -
Viun6g00868 941 PRINTS Disease resistance protein signature 373 387 - -
Viun6g00868 941 PRINTS Disease resistance protein signature 274 288 - -
Viun6g00868 941 Gene3D - 5 120 - -
Viun6g00868 941 PANTHER DISEASE RESISTANCE PROTEIN RP 31 862 IPR044974 GO:0006952
Viun6g00868 941 FunFam Probable disease resistance protein At1g63360 425 514 - -
Viun6g00868 941 Gene3D - 159 328 IPR027417 -
Viun6g00868 941 Gene3D Ribonuclease Inhibitor 512 705 IPR032675 -
Viun6g00868 941 Gene3D Ribonuclease Inhibitor 706 906 IPR032675 -
Viun6g00868 941 FunFam Probable disease resistance protein At1g61300 160 325 - -
Viun6g00868 941 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 439 IPR027417 -
Viun6g00868 941 Pfam Rx N-terminal domain 5 94 IPR041118 -
Viun6g00868 941 Coils Coil 54 74 - -
Viun6g00868 941 Gene3D - 335 424 IPR042197 -
Viun6g00868 941 SUPERFAMILY L domain-like 503 901 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00868 Viun-Chr6 18473302 18476250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00868 172 390 WRKY Transcription Factor Family AT5G45050 25.571 3.39e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00868 K13457 - gmx:121174068 1030.78