Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00867 ATGGCAGAAACTGCAGTGTCCTTTGTATTTCCAAAATTTTTGGAAGCTGTGAAGATGCTGAGAGATCTCCCAAAAGAAGTTGCAGAAGTTACTGACGAATCAGAAAGTTTTCAAGATTTCATCCATGATGCAAATAAAATCGCTGAAGCCGAAGAAGATAACAATAGGCGCGATAGAATGAGAAAAAGGTTGATGAGGCTGAGAAAAACAGCTTTTCTCATGGAAGATATCATCGATGACTATGTGATATGTGACGAAAAGCAACCTGAAGAAGATCCTTCACAAGAAGATCCTCGATGTGCAGTTTTACTCTGTGAGGCTGTTGAGTTCATCAAAACTCAAATCCTTCGCCTTCAAATAGCGTATCGGATTCAGACTGTTAAGTCACTTGCTCGTGCGGAAAGAGATGGCTTCGAAAACCATTTTCCTATAGGATCAAGATCAGACGATTCTAGAGGAAATGAAAATTTCACATGGCATAAACTTCGAATGGCTCCTCTTTTTAATAAGCAAGATGAGGTTGTTGGCTTTGAAAAGCCTATAGAAACACTGAAAAAGTGGTTGACACAGGGAAGAAAAGAACGCACTGTCATCTCTGTTGTAGGAATGGCAGGATTGGGAAAAACCACTCTTTCTAAGCACGTTTTTGACAAGGTCGATAAACACTTTGAGTGCCATGCAGTGATCACAGTGTCTCGACCCTATGATGTTGAACGACTGCTGAGGGATATAATGAAGGAGCTTTGCCAAGAAAGAAATGAGCATCCTGCTCAGGATGTTGAAACTATGAATCGAATGTCGTTGATAAAAGAAGTAAGAAAACGCTTGTCCAATAAGAGGTATGTTGTCTTGTTTGATGACGTATGGAACGAAACTTTTTGGGATGACATTGAATTGGCTCTAATTGATGATAAAAATGGAAGTAGGATATTAATCACTACCCGGGATGAGAAGGTTGTGGAATTCTGTAAGCAAGCTTTATTTTTTGAAGTTTATAAGTTACAACCTTTAAGTAAAGCAAAATCATTGGAGTTGTTATGTAAGAAGGCGTTTGGGTATGCTTTTGTTGGACGTTGTCCAAAAGATTATAAAGAAGTAGGTCTGGACATTGTCAGGAAGTGTGAGTGTTTACCTTTAGCGATTGTGGCCATTGGTAGTATTTTATATAGAAAATGTAAAAGTCCATATGATTGGCGCATGTTTAGTCAAAATCTAAGTTCAGAGTTGCAGAGCAATTACGAGTTACAAAGTGTAACAAAAATTTTAAGTTTGAGTTACGATGATTTGCAACAGAATCTGAGGTCATGTTTGTTGTATTTCGGAATGTATCCTGAAGATTACGAAGTGAACTGTGGTAGATTAATTCGGCAGTGGATAGCTGAAGGTTTTGTCAAACATGAAAATGGAAGAAATTTAGAAGAAGTTGCACAACAATATTTAATGGAGTTGATTAGTAGAAGTTTGGTTCTAGTATCGTCATTTACCACAGATGGCAGAGCTAAAGCATGTCGTGTTCATGACTTGGTACATGAAATGGTCCGTCGAAAAATTAAGAATACAGGGTTTTGTGAGTATATTGATGAGCATAATCATTTGGAGTCAAGTGGTAACATTCGACGCTTAACAATAGCAACAAGTTCCAATGGTTTAAGTGGATCTATGGAAGAATCACAACATGTTCGGTCAATTCTAATTTTCACGAATGAAGTGTCATCTAAAGACTTCACGAGCGCCTTGCTTGCAAAATACATGCGGTTGAAAGTGTTGGATTTTGAATTTACTCCATTATATGATGTTCCTGAGAATTTGGGGTGTTTAATCCACTTAAAGTATCTAAGCTTCAGGGAGACATGCATAAGAAGCCTTCCAAAATCCATTGGAAAGCTCCAAAACTTAGAGACATTAGATGTAAGAACACATATGGTGATTGAGGTACCAAAGGAGATTACGAAGCTTAGAAAGCTACGTCATCTTTGGGGTAGCCCAATATCTTCCACTTCGTTGAAGTATAGTGTTGGAAGCATGAAGTCCCTGGAAAAGATGAATGAATTGCGAATAGATCGAAATGGAGAGGTGATTAGAGAGATTGGAAAGCTAAAGCAATTAAGGGATCTGAGGGTTGTTGGTTTTAGGAGAGGTCATGCAGAGACTCTCTGTTCCTCACTAAACGAGATGCCACTTTTGGAGCGACTACATATCTCCTCCTCAGAATATGTGAGGTTTAGTGGCGATTTTTCTTCTTCGCTAAGGAAGGTAACAGTGGTGAAACTTCTTGATCGGAGAGAAATTGACTTTCACATTACGTCATCCTTGTCTAAACTGAGGAAGCTTCACCTGTATGCCGTTTTAAAAGAGTTCCCAAATTGGATTCTGCGGCTCCAAAGTCTTGTGAAACTGTCTTTGGTTGAATCCAAGTTAACTAACATTCCATTGAAATCTCTGGGAAATATGCCAAATTTGTTATTCCTCTGTTTCGATTCCAGATGTTATGAAGGAGAAACTCTGCATTTTGAAAATGGAGGATTTCAGAAACTAAAGGAACTGGAGCTCAAAGGTTTGGAGCAATTGAGGTCCATCTTTATTGAAAGGAGAGCACTGCAATATTTGGAAAAGCTTCATATAAAGACCGTTCCACGACTGAAGACAGTACCCTCTGGCATTCAACACTTGCAGAGACTCCAAGTTCTCCACATCTTGTATATGCCGAGAGAATTTCTGCATAGGATTAACCCCGATGGAGGAGAAGAGCACTGGATGATCAAACATGTGCCCTATGTACATTTTGGTCGAACATATCGTAAAAAGAGAAAAGAAGCAAGCAACTGTGCAGCTTGA 2835 0.3894 MAETAVSFVFPKFLEAVKMLRDLPKEVAEVTDESESFQDFIHDANKIAEAEEDNNRRDRMRKRLMRLRKTAFLMEDIIDDYVICDEKQPEEDPSQEDPRCAVLLCEAVEFIKTQILRLQIAYRIQTVKSLARAERDGFENHFPIGSRSDDSRGNENFTWHKLRMAPLFNKQDEVVGFEKPIETLKKWLTQGRKERTVISVVGMAGLGKTTLSKHVFDKVDKHFECHAVITVSRPYDVERLLRDIMKELCQERNEHPAQDVETMNRMSLIKEVRKRLSNKRYVVLFDDVWNETFWDDIELALIDDKNGSRILITTRDEKVVEFCKQALFFEVYKLQPLSKAKSLELLCKKAFGYAFVGRCPKDYKEVGLDIVRKCECLPLAIVAIGSILYRKCKSPYDWRMFSQNLSSELQSNYELQSVTKILSLSYDDLQQNLRSCLLYFGMYPEDYEVNCGRLIRQWIAEGFVKHENGRNLEEVAQQYLMELISRSLVLVSSFTTDGRAKACRVHDLVHEMVRRKIKNTGFCEYIDEHNHLESSGNIRRLTIATSSNGLSGSMEESQHVRSILIFTNEVSSKDFTSALLAKYMRLKVLDFEFTPLYDVPENLGCLIHLKYLSFRETCIRSLPKSIGKLQNLETLDVRTHMVIEVPKEITKLRKLRHLWGSPISSTSLKYSVGSMKSLEKMNELRIDRNGEVIREIGKLKQLRDLRVVGFRRGHAETLCSSLNEMPLLERLHISSSEYVRFSGDFSSSLRKVTVVKLLDRREIDFHITSSLSKLRKLHLYAVLKEFPNWILRLQSLVKLSLVESKLTNIPLKSLGNMPNLLFLCFDSRCYEGETLHFENGGFQKLKELELKGLEQLRSIFIERRALQYLEKLHIKTVPRLKTVPSGIQHLQRLQVLHILYMPREFLHRINPDGGEEHWMIKHVPYVHFGRTYRKKRKEASNCAA 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00867 944 Gene3D - 159 328 IPR027417 -
Viun6g00867 944 Gene3D - 426 517 IPR036388 -
Viun6g00867 944 Pfam Rx N-terminal domain 12 91 IPR041118 -
Viun6g00867 944 FunFam Probable disease resistance protein At1g63360 426 515 - -
Viun6g00867 944 Gene3D Ribonuclease Inhibitor 527 690 IPR032675 -
Viun6g00867 944 SUPERFAMILY L domain-like 504 903 - -
Viun6g00867 944 Gene3D Ribonuclease Inhibitor 691 905 IPR032675 -
Viun6g00867 944 FunFam Probable disease resistance protein At1g61300 159 326 - -
Viun6g00867 944 Gene3D - 4 121 - -
Viun6g00867 944 PRINTS Disease resistance protein signature 197 212 - -
Viun6g00867 944 PRINTS Disease resistance protein signature 840 856 - -
Viun6g00867 944 PRINTS Disease resistance protein signature 275 289 - -
Viun6g00867 944 PRINTS Disease resistance protein signature 374 388 - -
Viun6g00867 944 PANTHER DISEASE RESISTANCE PROTEIN RP 31 866 IPR044974 GO:0006952
Viun6g00867 944 Gene3D - 336 425 IPR042197 -
Viun6g00867 944 Pfam NB-ARC domain 178 428 IPR002182 GO:0043531
Viun6g00867 944 Coils Coil 50 70 - -
Viun6g00867 944 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 440 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00867 Viun-Chr6 18464070 18468618 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00867 173 395 WRKY Transcription Factor Family AT5G45050 26.222 2.47e-12 69.3