Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00866 ATGGCAGAAACTGCAGTGTCCCTTGCTAGTCAGCATGTGTTTCCAAAACTTTTGGAAGCTGTAAAGATGCTGAGAGATCTTCCAAAAAATGTTGCAGAAGTTACTGATGAATTAGAAAACTTTCAAGATTTCATCCATGATGCAAATAAAATGGCTGATGCTGAAGAAGATAGCAATAGGCGGGATAGAATAAGAAAAAGGTTGATGAGGCTGAGAGAAGCATCTTTTCGCATGGAAGATGTCATCGATGACTATGTGATGATATGTGACGAAAATCAACCTGAAGAAGGTCCTCGATGTGCAGCTTTACTCTGTGAGGCTGTTGAGTTCATCAAAACTCAAATCCACCACCTTCAAATAGCGTATCAGATTCAGGATGTTAAGTCACTTGTTCGCACAGAAAGGGAAGGCTTCATAAACCATTGTCCCATTGAACCAAGATCACACGGTTCTAGAGGAAAAGAAAATTTCACATGGCATAAATTTCGAATGGATCCTCTCTTTATTAAGGAACATGAGGTTGTTGGCCTTGAAGGCCCTACACAAACACTGAAAAAGTGGTTGACACTGACACAGGGAAGAGAGGAACGCACCGTCATCTCTATTGTAGGAATGGCAGGATTGGGAAAAACCACTCTTTCTAAGCAAGTCTTTGACAGGGTCCGTACAGACTTTGAGTGCCATGCATTGATCACAGTGTCTCGATCCTATACTGTTGAAGAGTTGCTGAGGACTATGACGAACGAGCTTTGCAAAGAAAGAAAGGAGGATCCTCCTCGAGATGTTTCAACTATGAATCAATTGTCGTTGATAAAAGAAGTCAGAAACCGCTTGCGCAATAAAAGGTATGTTGTCTTGTTTGATGATGTTTGGAATGAAACATTTTGGGATGACGTTGAATTGGCTATGATTGATGATAAAAATGGAAGTAGGATAATAATCACTACCCGGGAAGAGAAGGTTGCGGAGTTCTGTAAAAGTTGTTTACTTTATAGGCTACAACCTTTAAGTGAAGAAAAGTCACTGGAGTTGTTATGTAAAAAGGCATTTGGGTATGGCTTTCATGGATGTTGTCTAGAAGATTATGAAAAAGCAGGTCTGGGCATTGTTAGAAAGTGTGGATATTTACCTCTAGCAATTGTAGCTATCGGTAGTCTTTTATATAGAAAATGTAAAAGTCCATATGAATGGCGCCTGTTTAGTCAAAATCTAAGTTTAGAGATGGAGAGCAATTCCGAGTTAGACAGTGTAAAAAAAATTTTAAGTTTGAGTTACGATGATTTGTCACAGAATCTCAGATCATGTTTGTTGTATTTTGGAATGTATCCTGAAGATTATGAAGTTAAATGTGGTAGATTAATTCAGCAGTGGATAGCTGAAGGGTTTGTTAAACACGAACGCGGAAGAAATTTAGAAGAAGTTGCACAACAACAATTAATGGAGTTGATCAGTAGAAGCTTGGTACTAGTTGCATCATTTACCACGGATGGGAAAGTGAAAGCATGTCGTGTTCATGACTCAATGCATGAAATGATCCGTGGAAAAATGAAGAATACGGGGTTTTGTGAGTATATTGATGAGCATAATCATTTGGAGTCAAGTGGTATCACTCGACGCTTAACAATAGCAACAAGCTCCAATATTAATGGTTTAAGTGGATGTATTGAAGGATCACATGTTCGGTCAATTCTAATTTTGACGAATGAAGTGTCATCTGTAGACTTCAACAGCCGCTTGCTTGCAAAACACACGCGGTTGAAGGTGCTGGATTTGGAATTTACTCCATTACATGATGTTCCTGAGAATTTGGGGTGTTTAATCCACTTAAAGTATCTAAGCTTCAGGGAGACATTCATAAGAAGCCTTCCAAAATCCATTGGAAAGCTGCAGAACTTGGAGACACTAGATGTAAGAACATATATGGAGATTGAGGTACCAAAGGAGATTACGAAGCTTAGAAAGCTACGTCATCTTTTGGGTAGCACAATATCTTCCAGTTCATTGAAGGATAGTCTTGGAAGCATGAGGTCCCTGGAAAAGATGCATGAATTGGGAATAGATGAAGATGGAGTGGTGCTTAGAGAGCTTGGAAAGCTAAAGAAATTAAGGGATTTGAGGCTTGTTAGTCTCAGGAGAGATCATGCGGAGACTCTCTGTTCCTCACTAAACGAGATGCCACTCTTGGAGCGACTACATATCTCCTTCGCAGAATATCTAAGGCTTTCTAATTTTACGGAAGATCCTGCAGCTCTTTCTTCCTCAATAAGGAAGATACAAGTACGACGACCACTTGAGAGTGGAGTAATTGACTTGCACATTACGTCATCGTTGTCTAAACTGAGGAAGCTTTATCTGTATGCCAATTTAAAAGAGTTCCCAAATTGGATTTCTCGTCTCCAAAATCTTGTGAAATTGTCTTTGGTTGAATCAAAGTTAACTAACATTCCGTTGACAGATCTGGGAAGTATGCCAAATTTGTTGTTGCTCTCTTTTGACTCTAATTCTTTTGAAGGAGAAACTTTGCATTTTGAAAATGGAGGATTTCAGAAACTCAAGGAACTAGAATTCAAATGTTTGTATAATTTGAGTTTCATCCTTATTGATAGCGGGGCACTGCCATCTTTGGAAAAGCTTCAGATAGTGGCTATTCCACAACTGAAGATAGTACCCTCTGGCATTCAACACTTGAAGAAACTCCAAGTTCTCTACATCGTGCATATGCCGACAGAATTTCTTCAGAGGATTGACCCCGAGGGAGGAGATGAGCACTGGATGATCAAACATGTGCCCTATGTACATTTTAGTCACTATATATCGTAA 2820 0.394 MAETAVSLASQHVFPKLLEAVKMLRDLPKNVAEVTDELENFQDFIHDANKMADAEEDSNRRDRIRKRLMRLREASFRMEDVIDDYVMICDENQPEEGPRCAALLCEAVEFIKTQIHHLQIAYQIQDVKSLVRTEREGFINHCPIEPRSHGSRGKENFTWHKFRMDPLFIKEHEVVGLEGPTQTLKKWLTLTQGREERTVISIVGMAGLGKTTLSKQVFDRVRTDFECHALITVSRSYTVEELLRTMTNELCKERKEDPPRDVSTMNQLSLIKEVRNRLRNKRYVVLFDDVWNETFWDDVELAMIDDKNGSRIIITTREEKVAEFCKSCLLYRLQPLSEEKSLELLCKKAFGYGFHGCCLEDYEKAGLGIVRKCGYLPLAIVAIGSLLYRKCKSPYEWRLFSQNLSLEMESNSELDSVKKILSLSYDDLSQNLRSCLLYFGMYPEDYEVKCGRLIQQWIAEGFVKHERGRNLEEVAQQQLMELISRSLVLVASFTTDGKVKACRVHDSMHEMIRGKMKNTGFCEYIDEHNHLESSGITRRLTIATSSNINGLSGCIEGSHVRSILILTNEVSSVDFNSRLLAKHTRLKVLDLEFTPLHDVPENLGCLIHLKYLSFRETFIRSLPKSIGKLQNLETLDVRTYMEIEVPKEITKLRKLRHLLGSTISSSSLKDSLGSMRSLEKMHELGIDEDGVVLRELGKLKKLRDLRLVSLRRDHAETLCSSLNEMPLLERLHISFAEYLRLSNFTEDPAALSSSIRKIQVRRPLESGVIDLHITSSLSKLRKLYLYANLKEFPNWISRLQNLVKLSLVESKLTNIPLTDLGSMPNLLLLSFDSNSFEGETLHFENGGFQKLKELEFKCLYNLSFILIDSGALPSLEKLQIVAIPQLKIVPSGIQHLKKLQVLYIVHMPTEFLQRIDPEGGDEHWMIKHVPYVHFSHYIS 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00866 939 Gene3D - 4 121 - -
Viun6g00866 939 Pfam Rx N-terminal domain 5 87 IPR041118 -
Viun6g00866 939 FunFam Probable disease resistance protein At1g61300 161 327 - -
Viun6g00866 939 Gene3D Ribonuclease Inhibitor 556 688 IPR032675 -
Viun6g00866 939 SUPERFAMILY L domain-like 503 911 - -
Viun6g00866 939 Pfam NB-ARC domain 183 427 IPR002182 GO:0043531
Viun6g00866 939 FunFam Probable disease resistance protein At1g63360 425 513 - -
Viun6g00866 939 Gene3D - 165 329 IPR027417 -
Viun6g00866 939 Gene3D Ribonuclease Inhibitor 692 916 IPR032675 -
Viun6g00866 939 Gene3D - 335 424 IPR042197 -
Viun6g00866 939 PRINTS Disease resistance protein signature 373 387 - -
Viun6g00866 939 PRINTS Disease resistance protein signature 627 643 - -
Viun6g00866 939 PRINTS Disease resistance protein signature 277 291 - -
Viun6g00866 939 PRINTS Disease resistance protein signature 199 214 - -
Viun6g00866 939 Gene3D - 425 516 IPR036388 -
Viun6g00866 939 PANTHER DISEASE RESISTANCE PROTEIN RP 33 880 IPR044974 GO:0006952
Viun6g00866 939 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 439 IPR027417 -
Viun6g00866 939 Coils Coil 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00866 Viun-Chr6 18455238 18458517 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00866 200 394 WRKY Transcription Factor Family AT5G45050 26.531 5.49e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00866 K13457 - gmx:100799057 988.793