Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00863 ATGGGTATCTCTCGTGATTCCATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAAGCTTGGAGGAAGAAGAGAAAGTATGAGCTTGGGAGGCAGCCAGCAAACACAAAGCTGTCAAGCAACAAGACAATTAGGAGAATTAGGGTTCGTGGTGGAAATGTGAAGTGGCGTGCTTTGAGGCTTGATACTGGGAACTATTCTTGGGGGAGTGAGGCTGTTACTCGCAAAACAAGGATTCTTGATGTGGTGTACAATGCATCCAACAATGAGCTTGTTCGGACTCAGACGTTGGTCAAGAGCGCCATTGTTCAGGTCGACGCGGCGCCCTTCAAGCAGTGGTATCTGCAGCATTATGGCGTTGACATTGGTCGCAAGAAGAAGATTGCAGCTTCTACCAAGAAGGAAGGAGAGGATGGTGAAGCTGCAACCGAGGAGGTGAAGAAGAGTAACCATGTCATGAGAAAATTGGAAAAGCGAAAACAGACCCGGGTGCTTGATTCTCACATTGAAGAGCAATTTGGGGGTGGTCGCCTTTTGGCTTGTATCTCATCCCGACCTGGCCAATGTGGCCGTGCTGATGGATATATATTAGAGGGCAAAGAGCTGGAATTTTACATGAAGAAGCTTCAAAAGAAGAAGGGCAAGGGCGCTGCTTAA 657 0.484 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTIRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKIAASTKKEGEDGEAATEEVKKSNHVMRKLEKRKQTRVLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00863 218 NCBIfam ribosomal protein eS8 1 199 IPR001047 GO:0003735|GO:0005840|GO:0006412
Viun6g00863 218 PANTHER 40S RIBOSOMAL PROTEIN S8 1 215 IPR001047 GO:0003735|GO:0005840|GO:0006412
Viun6g00863 218 FunFam 40S ribosomal protein S8 32 161 - -
Viun6g00863 218 MobiDBLite consensus disorder prediction 11 26 - -
Viun6g00863 218 Gene3D - 32 160 - -
Viun6g00863 218 CDD Ribosomal_S8e_like 5 197 - -
Viun6g00863 218 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Viun6g00863 218 MobiDBLite consensus disorder prediction 1 39 - -
Viun6g00863 218 Pfam Ribosomal protein S8e 5 197 IPR022309 -
Viun6g00863 218 FunFam 40S ribosomal protein S8 162 215 - -
Viun6g00863 218 Gene3D - 161 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00863 Viun-Chr6 18415395 18417899 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00863 1 206 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.437 5.57e-128 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00863 K02995 - gmx:100527325 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g00863 6 18415395 18417899 Viun6g00863 6 18415395 18417899 ECH