Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun6g00860 | ATGCCACAGAGAAAAGGTTGCAGTATTTTTAATGAGCCTTGTTTTGTCGCCAAGAAATTCTTGGCAAGACCTCAGCATGAGGGTGTTGGAGCTGTTGTTAGAAGAAGCATAGGAAGGTTTGAGCTCAAGTACTTTGATCCCTTCCTTATGTTGGATGAATTCTCAGTTACTGCTCCTGCTGGTTTTCCTGATCATCCTCACAGAGGCTTTGAGACAGTCACATACATGTTGCAGGGAGCTATCACGCATGAAGATTTTGAAGGACATAAAGGGACTATAGAAGCTGGTGACTTGCAATGGATGACTGCTGGTAGAGGGATTGTGCACTCAGAAATGCCTGTTGCACAAGGAACACAAAAGGGTCTTCAATTGTGGATCAACCTTGCTTCCAAATATAAAATGATTGAACCAAGGTATCAAGAAGTGTTGAGTAAGGACATAGCAGAAGGTGAGGATGATGGTGTGAAGGTGAGAGTTATAGCTGGTGAATCACTAGGGATAAAGTCTCCAATCTACACAATGACTCCAACCATGTTCTTGGATTTCTCTCTCAAACCTGGAGCACACTTGCAGCAACCTATACCAGAAACTTGGAATGCTTTTGTGTACATATTGGAAGGAGAGGGTATCTTTGGAAACATGAAATCTCAACCTTCAAATTCTCACCATATTCTTCTTCTTGCTCATGGTGATGGCCTAGAGGCATGGAACAAGTCTTCTAAGCTCCTTAGGTTCATATTGGTTGGAGGAGAACCTTTGGAGGAACCTCTAGTGCAATTTGGACCCTTTGTGATGAACACTCAGGAAGAGATTGACCAAACCATTAATGATTTTGAGAACTTTGCTAATGGATTTGAGAAAGCAAGAGATTGGAGATCTGAAAAGGAAATGGATTAA | 897 | 0.4192 | MPQRKGCSIFNEPCFVAKKFLARPQHEGVGAVVRRSIGRFELKYFDPFLMLDEFSVTAPAGFPDHPHRGFETVTYMLQGAITHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPVAQGTQKGLQLWINLASKYKMIEPRYQEVLSKDIAEGEDDGVKVRVIAGESLGIKSPIYTMTPTMFLDFSLKPGAHLQQPIPETWNAFVYILEGEGIFGNMKSQPSNSHHILLLAHGDGLEAWNKSSKLLRFILVGGEPLEEPLVQFGPFVMNTQEEIDQTINDFENFANGFEKARDWRSEKEMD | 298 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun6g00860 | 298 | Gene3D | Jelly Rolls | 27 | 279 | IPR014710 | - | |
Viun6g00860 | 298 | CDD | cupin_pirin_C | 176 | 252 | - | - | |
Viun6g00860 | 298 | SUPERFAMILY | RmlC-like cupins | 16 | 293 | IPR011051 | - | |
Viun6g00860 | 298 | PANTHER | PIRIN-RELATED | 8 | 295 | IPR012093 | - | |
Viun6g00860 | 298 | PIRSF | Pirin | 12 | 292 | IPR012093 | - | |
Viun6g00860 | 298 | CDD | cupin_pirin_N | 31 | 128 | - | - | |
Viun6g00860 | 298 | FunFam | pirin | 27 | 158 | - | - | |
Viun6g00860 | 298 | Pfam | Pirin C-terminal cupin domain | 179 | 283 | IPR008778 | - | |
Viun6g00860 | 298 | Gene3D | Jelly Rolls | 148 | 253 | IPR014710 | - | |
Viun6g00860 | 298 | Pfam | Pirin | 33 | 126 | IPR003829 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun6g00860 | Viun-Chr6 | 18394799 | 18398407 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun6g00860 | 13 | 289 | Calmodulin-binding Proteins | AT3G59220 | 58.781 | 2.35e-121 | 347 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun6g00860 | K06911 | - | gmx:100802484 | 548.895 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Viun6g00860 | 6 | 18394799 | 18398407 | Viun6g00860 | 6 | 18394799 | 18398407 | ECH | |
Viun6g00860 | 6 | 18394799 | 18398407 | Viun8g02917 | 8 | 36919633 | 36922579 | PCT |