Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00814 ATGTCTAATTTGCCCCAATCGCTGTCTATGGGTGCGGCCTTCGGCGGCGGTCCACCATCTTCGTCCAGTGGGGCCGGAACGCAGGGCTCCGGTGCAGGCAAAGATCGGAAGATGGCATCTGCTGAGCAACTGGTATTGGAACTCAGCAACCCTGAACTCCGAGAAAATGCGCTTCTGGAACTTTCTAAGAAGAGGGAGCTATTTCAAGATCTGGCTCCTTTGTTATGGAATTCTTTTGGTACTATTGCTGCACTTTTGCAGGAAATAGTTTCAATTTACCCAGTTCTTTCACCACCAAATCTTACTCCTGCACAATCAAATCGAGTGTGTAATGCTCTTGCCCTTCTTCAGTGTGTAGCATCTCACCCGGATACAAGGATGCTATTCCTCAATGCTCATATACCTTTATATCTGTACCCCTTCCTTAATACAACAAGCAAGTCAAGACCATTTGAGTACTTGAGGCTTACCAGTCTTGGTGTCATCGGTGCATTGGTGAAGGTCGATGATACAGAAGTTATAAGTTTCCTTCTTTCAACAGAAATAATTCCTCTGTGCTTGCGCACCATGGAAATGGGCAGTGAGCTATCCAAAACAGTTGCAACATTTATTGTTCAAAAAATTCTTTTGGACGATGTCGGCCTGGACTATATTTGTACTACAGCCGAGCGCTTTTTTGCGGTCGGTAGAGTTTTGGGGAACATGGTGGCAGCTCTTGCTGAGCAACCCTCATCTCGTCTACTGAAGCATATCATTCGGTGCTATCTTCGCCTGTCAGATAATCCAAGGGCTTGCGATGCATTAAGAAGCTGTTTACCAGACATGTTAAGAGATGCCACTTTCAGCAGTTGCCTTCGTGAAGACCCCACAACTAGAAGGTGGCTACAACAGTTGCTTCACAATGTTGGAGTGAATCGAGTTCCTGCACTACAAGCTGGAGGAGGTTTCGATCATATGATTGTTACCTGA 969 0.4592 MSNLPQSLSMGAAFGGGPPSSSSGAGTQGSGAGKDRKMASAEQLVLELSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNVGVNRVPALQAGGGFDHMIVT 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00814 322 MobiDBLite consensus disorder prediction 1 36 - -
Viun6g00814 322 FunFam Cell differentiation protein RCD1 34 305 - -
Viun6g00814 322 Gene3D - 33 303 IPR011989 -
Viun6g00814 322 PANTHER UNCHARACTERIZED 37 305 IPR007216 GO:0006402|GO:0030014
Viun6g00814 322 Pfam Cell differentiation family, Rcd1-like 44 302 - -
Viun6g00814 322 SUPERFAMILY ARM repeat 46 277 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00814 Viun-Chr6 17890600 17898478 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Viun6g00814 Rcd1 3.5e-130 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00814 K12606 - gmx:100784529 603.979