Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00802 ATGTGGGTTTCGCATCATCCATTGTTTCTTCTCTACATTCTTTGTGGCCTCTGTTTTTCCCTGCAGTTCACAAGGGGTTATGCAGATTCAAGTGCTGAAAGAATTTTGAATCAGGTGGATGGTGATCATCAAATACATTGCTCTAGAGAAAGAAGTAGAACAGCTTGGAAGATCATTCAAGAGTATTTGATGCCCTTTGTGGAGAAAGAAAAATATCATATCCCAAAACGGTGTAGGTTTCACCCTGACAATGACATATACAGAGATCAGGAGCAGCACAAGTTTCATATAGATATAAATGAATGGCAATGTGGGTACTGTAAGAAAAGTTTTTATGAAGAGAAACATCTTGATCATCATTTTGACAACAGGCACTCCAATTTGCTTAATTTGAATGAAAGCCACTGCTTAGCAGATGTATGTGGTGCACTGCACTGTGACCATGAATTGAATTCTGGTTCAAAAAAATCAAAGTGCAATCCTGCCGCTGCTTCTAGGAATAAACATCTATGTGAGAGCTTAGCCAACAGTTGTTTTCCAATTAATGAGGGTCCTGTGGCAAGCCGACTTCATGAATTGTTCTTGCACCAATTCTGTGAGGCACACAGCTGCATTGGAAGTAGTCAACCTTTCTCAAGAGGGCGCAGGAAGAAGACAAATGTGTTCTACATCTTTCTGTCTATTTTGCTTGTGATACTGCTGCTACTATACTATCTCTACATTTACTTATATCAGAGAGGAATGAAAAAGGAAACCCAAGTGCTGAAGCGCATCTCACAAACCGGCAGAAAGAAAAAGCCATCCTAA 807 0.399 MWVSHHPLFLLYILCGLCFSLQFTRGYADSSAERILNQVDGDHQIHCSRERSRTAWKIIQEYLMPFVEKEKYHIPKRCRFHPDNDIYRDQEQHKFHIDINEWQCGYCKKSFYEEKHLDHHFDNRHSNLLNLNESHCLADVCGALHCDHELNSGSKKSKCNPAAASRNKHLCESLANSCFPINEGPVASRLHELFLHQFCEAHSCIGSSQPFSRGRRKKTNVFYIFLSILLVILLLLYYLYIYLYQRGMKKETQVLKRISQTGRKKKPS 268
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00802 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 102 127 IPR013087 -
Viun6g00802 268 PANTHER ZINC FINGER PROTEIN-RELATED 19 267 - -
Viun6g00802 268 ProSitePatterns Zinc finger C2H2 type domain signature. 104 125 IPR013087 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Viun6g00802 Viun-Chr6 17795878 17799752 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00802 24 268 C2H2 Transcription Factor Family AT5G63280 59.274 1.03e-108 313
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Viun6g00802 None None None
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00802 - - gmx:100527694 462.996