Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00795 ATGGCAAACAGCAACGATGTTGCCAATGGTGAAAATGGGTTGTTGGCGGTCTTTGGTGGCAATGAATTTGGTGGCGGCGGTGGTGGTGAAAGTGGTGGCAAAGTGGAGGAGGTGGCTCTGAAGAAAGGTCCTTGGACAGCTGCAGAAGATGCTGTTCTCATAGATTATGTGACAAAACATGGTGAAGGGAATTGGAATGCAGTGCAGAGGAACACAGGGTTGAATAGGTGTGGCAAGAGTTGTAGGCTTAGATGGGCCAACCATTTGAGGCCCAATTTGAAAAAAGGTGCTTTCTCTTCTGAGGAAGAAAAACTCATCGTTGAACTCCATTCACAATTTGGCAACAAATGGGCCAGAATGGCTGCTCTGATGCCTGGGAGAACAGACAATGAGATCAAGAACTATTGGAACACAAGGATCAAACGTCGACAAAGACAAGGTCTCCCTCTCTATTCAGACGAGAATGATCACCATTGTTCCACAGCACCAAATCCTTCTCCAAACCCTAATAACACTCTCACAAACTTTGAGTTCTTCAAACAAAACTATCATCATCAAGAACAACAACAACACCAACAACAACAACCTCTATCTCCAACTGCACCTCAACATTCCCCTCTCCAACAGAGACATCCCTTCACCAATTCTTCACCTTTCAGTTTCTTAGACCAGTCACCCCTTCCACTCTCCTCCTCTTCACCCTCCTCTCTCCCCTTCACCTTCCAAAGACCAGAACCACTCCTATGCAACCCTCTTCGCTTCAAACGCTACCGTGCCTCTTCAAGCTACAACCCTCTCCCTGACCTTCCTCTCACAACCCAGTTCCCTCATCTTGATGGATTCAGATTCCCGGTTTCTTCAGGCTTCTCTCCGTTTCTTCAACCCTCTTTGTTCGAATCTGACCGACCCATTTCTTCTTCCTCCTCCTTCCAACCCAAGTTCGATCTCCCTTCAACCCAGTTCTACAAACCACCCCAAGACCAAGACATTGATTTCAACGACCCTTCTTTCCAAACCAGCAGCGGCCTCCTGGGGGGTCTTCTCTTGGAGGCTCAGGCTCTGGCTTCGGGTCAGAACTCAAAGAAACGACCCCACTTGAGTTTAAACGAGGGAAACGATATCTTCGATGCATGCCAAAGCTTCGAGGACTTTCCATCTAGCTCTCTTTTCTGGCCTTCTTCTGCATCAGGAAAAGCGAAGGAAGAGGCACCTGATTTGAGCAAGTTCACGAATGAGGAGTTGTCGTCGTTGCTTACATCTTCCAACACACAGGGCCATGAGTGGCTCAACAATGGCGTTCCTGAAGGATCGAATGTGCAACCCTGTGGTAGTGGCATGATAGATGACAATTTTGGAGTTGATTTGAAGCCCGTGGCTTCGTTGTTTCCTCTCACCAACACCACAAACCATAACGAAAACCAAGGTTGTTACCCTTGGGACAATTTGCCTGGTCTCTGCTAA 1461 0.4771 MANSNDVANGENGLLAVFGGNEFGGGGGGESGGKVEEVALKKGPWTAAEDAVLIDYVTKHGEGNWNAVQRNTGLNRCGKSCRLRWANHLRPNLKKGAFSSEEEKLIVELHSQFGNKWARMAALMPGRTDNEIKNYWNTRIKRRQRQGLPLYSDENDHHCSTAPNPSPNPNNTLTNFEFFKQNYHHQEQQQHQQQQPLSPTAPQHSPLQQRHPFTNSSPFSFLDQSPLPLSSSSPSSLPFTFQRPEPLLCNPLRFKRYRASSSYNPLPDLPLTTQFPHLDGFRFPVSSGFSPFLQPSLFESDRPISSSSSFQPKFDLPSTQFYKPPQDQDIDFNDPSFQTSSGLLGGLLLEAQALASGQNSKKRPHLSLNEGNDIFDACQSFEDFPSSSLFWPSSASGKAKEEAPDLSKFTNEELSSLLTSSNTQGHEWLNNGVPEGSNVQPCGSGMIDDNFGVDLKPVASLFPLTNTTNHNENQGCYPWDNLPGLC 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00795 486 Pfam Myb-like DNA-binding domain 95 138 IPR001005 -
Viun6g00795 486 Pfam Myb-like DNA-binding domain 42 89 IPR001005 -
Viun6g00795 486 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 89 IPR017930 -
Viun6g00795 486 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 29 433 - -
Viun6g00795 486 FunFam MYB-related transcription factor 41 94 - -
Viun6g00795 486 CDD SANT 44 89 IPR001005 -
Viun6g00795 486 SMART sant 41 91 IPR001005 -
Viun6g00795 486 SMART sant 94 142 IPR001005 -
Viun6g00795 486 ProSiteProfiles Myb-like domain profile. 90 140 IPR001005 -
Viun6g00795 486 Gene3D - 97 143 - -
Viun6g00795 486 ProSiteProfiles Myb-like domain profile. 37 89 IPR001005 -
Viun6g00795 486 FunFam Transcription factor GAMYB 97 143 - -
Viun6g00795 486 CDD SANT 97 138 IPR001005 -
Viun6g00795 486 MobiDBLite consensus disorder prediction 150 219 - -
Viun6g00795 486 Gene3D - 41 94 - -
Viun6g00795 486 MobiDBLite consensus disorder prediction 157 219 - -
Viun6g00795 486 SUPERFAMILY Homeodomain-like 40 136 IPR009057 -
Viun6g00795 486 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 144 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00795 Viun-Chr6 17714702 17716417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00795 39 357 MYB Transcription Factor Family AT2G32460 41.714 1.13e-65 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Viun6g00795 Myb_DNA-binding 2.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00795 - - vun:114188481 890.182