Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00787 ATGGTTGAGTTGGAAATCCAAGTCCCCACCCCATTCGACCCGTTTGCTGAGGCTAGAGAATCGGATGCTCCAGGAGCGAAGGAGTATGTGCACATTCGGATCCAACAGAGGAATGGAAAGAAGAGTCTGACCACAGTGCAGGGGCTGAAGAAGGAGTTCAGCTACGAGAAGATTCTGAAAGACCTCAAGAAAGAGTTCTGCTGCAACGGCAATGTGGTGCAGGACAAGGAGCTTGGCAAGATAATTCAGCTCCAAGGTGACCAGCGCAAGAACGTCTCACACTTCTTGGTCCAGGCAGGCCTTGTCAGAAAGGACCAGATCAAGATTCATGGTTTTTGA 339 0.5015 MVELEIQVPTPFDPFAEARESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVRKDQIKIHGF 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00787 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743
Viun6g00787 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743
Viun6g00787 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 112 - -
Viun6g00787 112 SUPERFAMILY eIF1-like 4 112 IPR036877 GO:0003743|GO:0006413
Viun6g00787 112 FunFam Eukaryotic translation initiation factor SUI1 2 112 - -
Viun6g00787 112 Gene3D - 1 112 - -
Viun6g00787 112 NCBIfam translation initiation factor SUI1 5 112 IPR005874 GO:0003743
Viun6g00787 112 Pfam Translation initiation factor SUI1 27 100 IPR001950 GO:0003743|GO:0006413
Viun6g00787 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00787 Viun-Chr6 17616962 17618359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00787 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 83.929 1.27e-69 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00787 K03113 - gmx:100791423 223.787