Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun6g00786 | ATGTTTTCTGGAATGATGCAAGCAACAACAAGGTGTAAGGAGCTTCTTTCCATGTGGCTTTTGGCTGCCAGTGCCAATTATGCACTTCGTCGATTCATGAAAGTCATAGAGAGAGTTGTTTTTGCTGAATTTACTTGCATTGTGGCATTAGGAGGGTCCATAATGGGGATAATTGCAGGAGCCATCAGTGGCCACACCACAGAAGCTGGTTTTGTTGATGGTGCTTGCAAAGGAGCTGTGACAGGGGCAATTGCTGCACTACAATTGCTAAATAATGCTGCAGCTGCTGAGCCTCTGTCTAAGTTTGCCCTATTGAGGAGTTTGCTAAATGGAAAGGTATTTATGGAATGGATATGTCCAGTAGTTGCAAAAGTGTATCAATGTCATATGAATGCACATGGAACAAGTTACAGAGAAGAATCATCAGATATAAACAATGGCGTTGTGAGGGGAATCACAGTCAAAGAAATGACTTGGAATATCATCCGAGAGCTTCCTGTTCAACAATTCAATTCCAGTGAAATGTTGAATCTTTACAATGAATCATGCTGCTCAATTTGCTTCCAAGATTTTGAGGATGAAGAATTTGTGAAGACACTTCCAAACTGTGGCCACTTTTTTCACTTGGTGTGCATAGACAAATGGCTAGTTAAACAAGGATCATGTCCCATCTGTAGAATTTATGTTCCACAATTATGA | 699 | 0.4063 | MFSGMMQATTRCKELLSMWLLAASANYALRRFMKVIERVVFAEFTCIVALGGSIMGIIAGAISGHTTEAGFVDGACKGAVTGAIAALQLLNNAAAAEPLSKFALLRSLLNGKVFMEWICPVVAKVYQCHMNAHGTSYREESSDINNGVVRGITVKEMTWNIIRELPVQQFNSSEMLNLYNESCCSICFQDFEDEEFVKTLPNCGHFFHLVCIDKWLVKQGSCPICRIYVPQL | 232 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun6g00786 | 232 | Pfam | Ring finger domain | 184 | 226 | IPR001841 | - | |
Viun6g00786 | 232 | SUPERFAMILY | RING/U-box | 177 | 230 | - | - | |
Viun6g00786 | 232 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 149 | 231 | IPR013083 | - | |
Viun6g00786 | 232 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 20 | 226 | IPR044523 | - | |
Viun6g00786 | 232 | ProSiteProfiles | Zinc finger RING-type profile. | 184 | 226 | IPR001841 | - | |
Viun6g00786 | 232 | SMART | ring_2 | 184 | 225 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun6g00786 | Viun-Chr6 | 17573400 | 17575442 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun6g00786 | 42 | 229 | C3H Transcription Factor Family | AT5G66070 | 31.980 | 1.18e-32 | 116 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun6g00786 | - | - | gmx:100797332 | 329.717 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Viun6g00786 | 6 | 17573400 | 17575442 | Viun6g00786 | 6 | 17573400 | 17575442 | ECH |