Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00777 ATGGCGTTCTCCACAGCCAGCTTCACCACTGCTCCATATGGCTCTTGGAAGTCCCCCATCACAGGCGATGCTGTCTCCGGCGCCACCAAGGACCTCGGCGGCACCGCCGTGGATGGCCATGGCCGCCTCATCTGGCTAGAATTCCGTCCATTAGAATCAGGGCGTGGAGTTCTTGTTCTTGAGCCAGAAAAAACAGGAGGTGAGGCTGTGGATATTACTCCTAAGGAGTTTGGAGTGAGAACATTGGCTCAGGAATATGGAGGTGCTGCTTTTACTGTTTCAGGGGATGTTGTCTTCTTTGCAAATTACAATGATCAGAGGTTGTACACGCAGTCCATCACTTCTCTGGATGATCCTCCTGTACCTGTCACTCCGGATTATGGTGGACCTGTAGTCAGCTATGCCGATGGAATATTGGATGTACGATTTAACCGTTTTCTTTGTGTTAGGGAAGATCGTCGTGAAAGCAGTCTAAATCCACCTACAACTATTGTATCCATAGCACTTGGCAGCAAAGATGTTCAGGAACCAGTTGTGCTAGTTGGTGGGAGTGACTTCTATGCTTACCCACGTCTAGACTCTAAAAGTGAAAGAATAGCATGGATTCAGTGGAATCACCCCAACATGCCATGGGATAAAACAGAACTTTGGGTTGGCTATATTTCTGAAAATGGTGAGATCTACAAACGTGTTTGTGTTGCTGGGAATGATCCTTCACTTGTGGAATCTCCAACAGAGCCCAAGTGGTCCTCTGAGGGGGAGTTGTTTTTCATCACAGATAGGGAAAATGGTTTTTGGAATCTCCACAAATGGATTGAGTCTGAGAATAAGGTCGTGTCAGTTTATTCTTTGGAAGCTGAGTTTACAAGGCCGCTGTGGACTTTTGGTGTGAATTCTTATGAATTTGTTCAAAGTTCTAAAAAGTTAATTGCTTGTAGTTACAGGCAGCATGGAAAGTCATATCTGGGTATTGTTGATGTAGAGGGCTCAGAGCTAACTGTGATTGATTTCCCTTGCACAGACATAAATAACATAACGTCTGGTGATAATTGCTTGTACGTGGAGGGAGCATCAGAGGTTCTTCCATCATCAGTGGCCAAGGTGACTTTTGATGATGATAAATCAAAAGCAGTGGATTTCAATATTATCTGGTCCTCATCACCAGATAGTCTGAAGTATAGTTCATACATCAGTAAGCCAGAGTTAATTGAATTCCCAACTGACGTTCCTGGTCAAAATGCTTATGCATACTTTTATCCACCATCTAATCCTGATTTCCAAGCTAGTGAAGAAGAAAAGCCTCCACTATTATTGAAGAGCCACGGTGGCCCAACTCAAGAAACTCGTGGAATTTTAAATTTGAGCGTTCAGTATTGGACTAGCCGAGGTTGGGCAGTTGTTGATGTTAATTATGGTGGAAGCACTGGTTATGGCAGGGCATACAGAGAACGACTTTTGAGACAGTGGGGAATAGTTGATGTTAATGACTGTTGTAGTTGTGCTACATATTTGGTGGAGAGTGGAAAGGTGGATAAGGAGAGGCTTTGTATAATGGGTGGCTCTGCTGGTGGGTATACCACTTTGGCAGTTCTTGCTTTCAGAAATACTTTTCAGGCTGGTGCTTCTTTGTATGGAATAGCTGACTTGAACTTGTTGAGAGCAGAAACACATAAGTTTGAATCCCATTATGTTGAAAATCTAGTTGGAGATGATAAGGATATGTATGAAAGATCCCCTATCAATCATGTTGATGATTTTTCTTGTCCCATTATAATATTTCAAGGCTTGGAGGACAAGGTTGTGCCACCGGATCAAGCTGAAAAAATATACCAGGCAGTGAAGGAGAAAGGTGTGCCAGTTGCTCTTGTTGAGTATGAAGGAGAACAACACGGTTTCCGAAAGGCTGAGAACATTAAGAATACAATTGAACAAGAAATGGTCTTCTTCGCACGATTGATTGGGCACTTTGATGTTGCTGATGATATTACTCCTGTCAAAATTGACAACTTTGATTGA 2016 0.4315 MAFSTASFTTAPYGSWKSPITGDAVSGATKDLGGTAVDGHGRLIWLEFRPLESGRGVLVLEPEKTGGEAVDITPKEFGVRTLAQEYGGAAFTVSGDVVFFANYNDQRLYTQSITSLDDPPVPVTPDYGGPVVSYADGILDVRFNRFLCVREDRRESSLNPPTTIVSIALGSKDVQEPVVLVGGSDFYAYPRLDSKSERIAWIQWNHPNMPWDKTELWVGYISENGEIYKRVCVAGNDPSLVESPTEPKWSSEGELFFITDRENGFWNLHKWIESENKVVSVYSLEAEFTRPLWTFGVNSYEFVQSSKKLIACSYRQHGKSYLGIVDVEGSELTVIDFPCTDINNITSGDNCLYVEGASEVLPSSVAKVTFDDDKSKAVDFNIIWSSSPDSLKYSSYISKPELIEFPTDVPGQNAYAYFYPPSNPDFQASEEEKPPLLLKSHGGPTQETRGILNLSVQYWTSRGWAVVDVNYGGSTGYGRAYRERLLRQWGIVDVNDCCSCATYLVESGKVDKERLCIMGGSAGGYTTLAVLAFRNTFQAGASLYGIADLNLLRAETHKFESHYVENLVGDDKDMYERSPINHVDDFSCPIIIFQGLEDKVVPPDQAEKIYQAVKEKGVPVALVEYEGEQHGFRKAENIKNTIEQEMVFFARLIGHFDVADDITPVKIDNFD 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00777 671 Pfam Prolyl oligopeptidase family 455 654 IPR001375 GO:0006508|GO:0008236
Viun6g00777 671 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 8 666 - -
Viun6g00777 671 Gene3D alpha/beta hydrolase 392 659 IPR029058 -
Viun6g00777 671 SUPERFAMILY alpha/beta-Hydrolases 400 652 IPR029058 -
Viun6g00777 671 SUPERFAMILY Tricorn protease domain 2 85 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00777 Viun-Chr6 17431737 17441895 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00777 8 671 Carbohydrate Esterase AT5G36210 71.364 0.0 1002
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00777 - - gmx:100794040 1279.62