Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00689 ATGATATCTTCCTTGAGACAGCCTGTTGTGGGGATCAGTGGTTCTGATCTTCTTTTGAGGCAAAGACATGCAACCCCAGTTAAGGCACGGTCGTTTTTGCCTTCTTTGGCAAGGGAAAAGGGGCAGGGATCTCTGGTTTCAGTGCATAAGCCACTGCACATTGCTTCTTCTCTTGGTGGTCGAAATTTTGTGTCAGTGAAGAGTGATGGAAAGGGTGATTCGGTGAAGTGTGAGGCCTATGAGGCAGACAGATCAGAGGTTGAGTCTTCAAACACACCATCAGAGGCTTCAAAGAAGGTGAAGATTGGCATATATTTTGCAACCTGGTGGGCTCTGAATGTGGTGTTTAATATTTATAACAAGAAGGTGTTGAATGCCTACCCCTTCCCATGGCTGACTTCAACTCTCTCACTTGCATGTGGGTCTCTTATGATGTTGATCTCTTGGGCCACTGGGATTGCAGAAGCCCCGAAGACTGATCCAGAGTTTTGGAAGTCTTTGTTCCCTGTTGCCGTTGCACATACAATAGGACATGTGGCAGCAACTGTTAGTATGTCAAAAGTTGCGGTATCATTTACACATATAATCAAGAGTGGTGAGCCTGCTTTTAGTGTTCTGGTTTCAAGATTTCTCTTGGGTGAGACCTTCCCTGTGCCAGTCTATCTGTCTTTACTTCCGATCATTGGTGGGTGTGCACTTGCAGCTGTGACTGAACTCAATTTCAACATGACTGGTTTCATGGGTGCTATGATATCGAATTTGGCATTTGTATTCCGTAATATCTTTTCAAAAAAGGGAATGAAGGGAAAGTCTGTCAGTGGAATGAATTACTATGCTTGTTTATCTATTTTATCCCTTGCAATTCTCACACCCTTTGCAATTGCCGTGGAAGGGCCACAGATGTGGATTGCCGGATGGAAAACATCCATCTCTCAGATCGGAAACCAACTCATATGGTGGATAGCAGCTCAAAGTGTATTCTATCATTTATACAACCAAGTATCATACATGTCTCTGGATGAGATCTCTCCCTTGACATTTAGCATTGGAAACACCATGAAACGTATATCTGTCATAGTGTCTTCAATTATTATCTTCCACACTCCAGTTCAACCTGTCAATGCTCTTGGTGCCGCTATTGCTATCCTTGGAACCTTCTTATATTCACAGGCAAAACAATAG 1182 0.434 MISSLRQPVVGISGSDLLLRQRHATPVKARSFLPSLAREKGQGSLVSVHKPLHIASSLGGRNFVSVKSDGKGDSVKCEAYEADRSEVESSNTPSEASKKVKIGIYFATWWALNVVFNIYNKKVLNAYPFPWLTSTLSLACGSLMMLISWATGIAEAPKTDPEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLAILTPFAIAVEGPQMWIAGWKTSISQIGNQLIWWIAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFLYSQAKQ 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00689 393 PANTHER SOLUTE CARRIER FAMILY 35 101 392 - -
Viun6g00689 393 Pfam Triose-phosphate Transporter family 101 389 IPR004853 -
Viun6g00689 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 236 - -
Viun6g00689 393 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 101 392 IPR004696 GO:0016020|GO:0022857|GO:0055085
Viun6g00689 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 292 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00689 Viun-Chr6 16932235 16936407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00689 39 392 Antiporters AT5G54800 79.224 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00689 K15283 - gmx:100801832 714.146