Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun6g00686 | TCAGTTCACTATGAAGGCACACTTGCTGATACCAGTGAAGTTTTTGACACAACACATGAAGATAACACTATATTTTCTTTTGAGATTGGGAAGGGCAGTGTTATCAAGGCTTGGGAGATTGCATTCAAAACCATGAAGGTCGGAGAAGTTGCAAAAATAACTTGCAAGCCAGAATATGCATATGGCAGTGCGGGATCTCCTCCAGATATTCCTCTAGAGTACTATTCTCATGCCACAACAATAAAGAAAACTTATCTATCCAATTGGACTAATCTATCCAATTCTAGATCATATAGGTAA | 300 | 0.3833 | SVHYEGTLADTSEVFDTTHEDNTIFSFEIGKGSVIKAWEIAFKTMKVGEVAKITCKPEYAYGSAGSPPDIPLEYYSHATTIKKTYLSNWTNLSNSRSYR | 99 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun6g00686 | 99 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 1 | 71 | IPR001179 | GO:0003755 | |
| Viun6g00686 | 99 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 2 | 71 | - | - | |
| Viun6g00686 | 99 | SUPERFAMILY | FKBP-like | 2 | 71 | - | - | |
| Viun6g00686 | 99 | Gene3D | - | 1 | 85 | IPR046357 | GO:0003755 | |
| Viun6g00686 | 99 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 1 | 71 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Viun6g00686 | Viun-Chr6 | 16905093 | 16905489 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Viun6g00686 | 2 | 71 | Calmodulin-binding Proteins | AT5G48570 | 52.857 | 2.55e-18 | 76.6 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun6g00686 | K01802 | - | vun:114187161 | 207.223 |