Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00668 ATGGTAGCCATTGTTGCTTCTTACAGTGTCTTCCCAAGTAAAGAAACTCCCAAAGGTCATTTATGGCTATCAGATAGTGACCAAGTCGTGCGTTCAGGTCACACACCCACTATCTATGTATACAAAGCAAAACACATTGATGACACCACTAAGAGGTTGATAAACTCTCTTGCTGAGATTTTAGTGCACTACTATCCACTTGCTGGCAGGTTGAGCTTAGCAGAAAGTGGTCGAATTGAAGTGGATTGCAATGCGAAAGGAGTGACTTTTATCGAAGCTGAAACCACAAAATCATTGGGTGATTATGGAGATTTTTCACCTTCTGAGTCTGTCAAGGAGCTTGTTCCAAAGATTGATTACACTCAACCCATAGAGGAAATTCCTTTGTTGCTTGTGCAGTTCACAAGATTCCGTGGTGGTGAAGGCTTTGTCGTTGGAGTGGCTTTCTGTCACCCTTTGGCTGATGGGCTTGCTGGCACTCAGTTCATCAATTTATGGGCAAAAGTGGCTCGTGGAGAGACACTTGAGCCACATGAATTGCCCTACCTTGATAGAACAATACTCAAACTCCAACACTCATCAGCATCACCATGCTTTGATCACCCCGAGTTGAAGCCTCTACCGCTAAAGCTAGGAAGCTCTGACGTCAATGCTGAGCAAAGCAAGAAGACAAGTGGTGTGTTACTGAAACTAACGCCAGAACAGGTGCAGAAGCTGAAGAAGGAGGCGAATGAAGAAGCCTTGGAAGAAGGGGTTAGAGAATATAGCAGATTTGAAGCTATTGCAGGTCATGTATGGAGATGTGCATGTAAGGGTCGTGAACTTGATGAGAAGCAACCAACGGTGGTTCGGTTCAATGCGGATATCCGCAGCAGATTAATCCCTCCTCTCCCTAGGAATTACTTTGGGAATGCTTTGGCAGCAACGGTGTCAGCCGAATGCTATGTGGGAGAAATAGTGTCAAAGCCGTTGAGCTATGGTGCACAAAAGGTAAGAGAAGCGATTGAAAAGCTTAGTAATGAGTACATACGGTCACAATTGAGGATTGTGTTGGGCGAGGAGCAATTGGATTGCATAAGGGGTTTGTTCTTGGGACAGGGAGAGCGTATGAATGTCCCTTTTGCTGGGAATCCGAATCTTCAAATCACAAGCTGGATGAGCATGGCAGTGTACGAAGCAGATTTTGGATGGGGAAAGCCTGTGTTCTTCGGGTTGGCGTATGTTTCTGCGCAAGATAGGGCAGTGATTCTTCAAAGTCCAGATGGTGATGGTTCCATTATTGTGTCCATGCACTTCCAAGAACCACATTTGGAGCTTTTCAAGAAATTCTTCTACCAGAGTTTGTGA 1347 0.4514 MVAIVASYSVFPSKETPKGHLWLSDSDQVVRSGHTPTIYVYKAKHIDDTTKRLINSLAEILVHYYPLAGRLSLAESGRIEVDCNAKGVTFIEAETTKSLGDYGDFSPSESVKELVPKIDYTQPIEEIPLLLVQFTRFRGGEGFVVGVAFCHPLADGLAGTQFINLWAKVARGETLEPHELPYLDRTILKLQHSSASPCFDHPELKPLPLKLGSSDVNAEQSKKTSGVLLKLTPEQVQKLKKEANEEALEEGVREYSRFEAIAGHVWRCACKGRELDEKQPTVVRFNADIRSRLIPPLPRNYFGNALAATVSAECYVGEIVSKPLSYGAQKVREAIEKLSNEYIRSQLRIVLGEEQLDCIRGLFLGQGERMNVPFAGNPNLQITSWMSMAVYEADFGWGKPVFFGLAYVSAQDRAVILQSPDGDGSIIVSMHFQEPHLELFKKFFYQSL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00668 448 Gene3D - 211 447 IPR023213 -
Viun6g00668 448 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 442 - -
Viun6g00668 448 Coils Coil 328 348 - -
Viun6g00668 448 Gene3D - 1 206 IPR023213 -
Viun6g00668 448 Pfam Transferase family 1 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00668 Viun-Chr6 16771958 16773460 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00668 2 446 Monolignol Biosynthesis Gene Families AT5G48930 35.714 3.08e-95 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00668 K13065 - gmx:100779814 694.886