Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00666 ATGGTAACCATTGTGCGTTCTTACAATGTCACTCCAAATGAACCAACTCCCAGTGATCCTTTATGGCTATCAGATAGTGACCAAATCGGGTCCCTAGGTCACGTACCCAATATCTTCATCTACAAAGCAAAACACAGCAACAACCCCATCGAGAAGATGATGAACTCTCTTAGCAAGATTTTAGTTCACTACTATCCAGTAGCTGGAAGATTGAGTTTGACGGAAGATGATCGCATGGAGGTGAATTGCAACGCAAAGGGAGTCACGTTGCTCGAAGCCGAAAGCACAAAATCATTTGGTGATTATGGAGACTTTTCACCATCAGAATCAACGGAAGAACTTGTTCCAAAAGTTGATTACACTCAACCTATAGAGGAGATTCCCCTTCTGCTACTTCAGGTAACAAGGTTCCATGGTGGTGAAGGACTTGCCCTTGGAGTTCTTATCTCTCACCCTATCACCGATGCAACCGGCATCATCCGCTTCGTGAACAATTGGGCAAAGGTGGCTCGAGGAGAAGAACTATTGCCTCATGAGATTCCATTTCTAGATCGAACAGGACTCAAATTTCCACACCAAAACTCATCACCTAGAGTTAAACTCCCAGAGTGGAAGCCTGTACCACAGATAGAGCAAAGAAAGAGAAGTGCTTTGTTGTTGAAACTCACATCAAGCCAAGTGGAGAGGCTAAAGAAGAAAGCCAATGAAAAACCTTCAAAAGAAAGGGTAAGACCCTATACCAGATTTGAAGCTGTTGCTGCTCATATATGGCGATGTGCAGCCAAGGCTCGTGAATCTAGTGAGAACCACCCAACTTTTGTTCGGTTCAGTGTTGATTTTCGAAGTAGATTGAATCCACCTCTCCCTCAAAACTATTTTGGGAATGCTTTGGCCAAAGGAGTGACACCAAAATGTTATGAGGGAGATATCATATCAAACCCTTTAGGTTTTTCTGCTGAAAAGATTAGAGAAGCAGCTCATGCAGTTACAGATGAGTTTATAAGGTCACAGTTGAAGGCTAGTTTAGGAAAAGGGCAAAAGGATCACATAAGGGCCTTTTTCAAGGGACAGGGGCACCTTATGAATGTGCCTTATGCTGGGAACCATAACATTCTGCTTACAAGCTTGACGAGGATGCCGGTGTATGAAGCAGATTTTGGTTGTGGAAAGCCTGTGCATTTTGGTATAGCACGTTCCTTTCAAGAAGATAGAGCAGTGATTGTTCGAAGCCCAGATGGAGATGGTGTTGTTGTCACCATAATCTTCCAGACACCACTTATGCAGCTTTTCCGAAAATTCTTCTACGAGGATCTGTTTGTGTCCTCGTTATAA 1332 0.4339 MVTIVRSYNVTPNEPTPSDPLWLSDSDQIGSLGHVPNIFIYKAKHSNNPIEKMMNSLSKILVHYYPVAGRLSLTEDDRMEVNCNAKGVTLLEAESTKSFGDYGDFSPSESTEELVPKVDYTQPIEEIPLLLLQVTRFHGGEGLALGVLISHPITDATGIIRFVNNWAKVARGEELLPHEIPFLDRTGLKFPHQNSSPRVKLPEWKPVPQIEQRKRSALLLKLTSSQVERLKKKANEKPSKERVRPYTRFEAVAAHIWRCAAKARESSENHPTFVRFSVDFRSRLNPPLPQNYFGNALAKGVTPKCYEGDIISNPLGFSAEKIREAAHAVTDEFIRSQLKASLGKGQKDHIRAFFKGQGHLMNVPYAGNHNILLTSLTRMPVYEADFGCGKPVHFGIARSFQEDRAVIVRSPDGDGVVVTIIFQTPLMQLFRKFFYEDLFVSSL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00666 443 Gene3D - 1 206 IPR023213 -
Viun6g00666 443 Pfam Transferase family 1 435 - -
Viun6g00666 443 Gene3D - 209 437 IPR023213 -
Viun6g00666 443 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00666 Viun-Chr6 16744646 16746264 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00666 2 436 Monolignol Biosynthesis Gene Families AT5G48930 33.929 9.31e-75 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00666 K13065 - gmx:100802888 645.195