Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00624 ATGGTAGCCATTGTTGCTTCTTACAGTGTCTTTCCAAGTAAAGAAACTCCCAAAGGTCATTTGTGGTTATCAGACAATGACCATGTCTGGCGTTCAGGTCACACACCCACTATCTATGTATACAAAGCCAAACACAGTGATGACACCATTCAGAGGTTGAGAAACTCTCTTCCTGAGATTTTGGTGCACTACTATCCACTTGCTGGCAGGTTAACCTTACGAGAAACTGGTCGAATGGAAGTGGATTGCAATGCCAAGGGAGTGACATTGCTTCAAGCTGAAACCACAAAATCATTGGCTGATTATGGAGATTTTTCACCTTCTGACTCTGTCAGGGAGCTTGTTCCAAAGATTGATTACACTCAACCCATAGAGGAAATTCCTTTGTTGCTTGTGCAATCCACAAGATTCCATGATGGTGAAGGCTTTGTCATTGGAGTGGCTTTCTGTCACCCTTTGGCTGATGGGCTTGCTGGCACTCGGTTCATCAATTCATGGGCAAAACTGGCTCGTGGAGAGACACTTGAGCCACATGAATTGCCCTACCTTGATAGAACAATACTCAAACTCCAACACTCATCGACATCACCGTGCTTTGATCACCCCGAGTTGAAACCTCTACCGTTAAAACTAGGAAGCTCTGATATCAATGCTGAGCAAAGCAAGAAGACAAGTGGTGTGTTACTGAAACTAACGCCAGAACAGGTGCAGAAGCTGAAGAAGGAGGCGAATGAAGAAGCCTTGGAAGAAGGGGTTAGAGCTTATAGCAGATTTGAAGCTATTGCAGGTCATGTATGGAGATGTGCATGTAAGGCTCGTGAACTTGATGAGAAGCAACCAACGGTGGTTCGGTTCAATGGTGATGTCCGCAGCAGACTAGTTCCTCCTCTCCCTAGGAATTACTTTGGAAATGCTTTGGCTGAAACAGTGTCACCAGAATGCTATGTGGGAGAAATAGTGTCAAAGCCATTGAGCTATGGTGCACAAAAGATAAGAGAAGCAACTAAAAAGCTTAGAAATGAGTACATAAGGTCACAAATGGAGATTGTGTTAGGAGAGGAGCAATTGGATGGTATAAGGGGTTTCTTCTCGGGACAAGGAGAGCGTAATAGTTTCCCTTTTGCAGGGAATCCAAACCTTCATATCACAAGCTGGATGAGCATGCCAATGTATGAAGCAGATTTTGGATGGGGAAAGCCTGTGTTTTTTGGGTTGGCATATGTCTGTGCACATGATAGGGCAGTGATTCTGCTAGGTCCACATGGTGATGGATCCATTATTGTGTCCATGCATTTCCAAGAAGCACATTTGGAGCTTTTCAAGAAATTCTTCTACCAGAGTTTGTGA 1347 0.4425 MVAIVASYSVFPSKETPKGHLWLSDNDHVWRSGHTPTIYVYKAKHSDDTIQRLRNSLPEILVHYYPLAGRLTLRETGRMEVDCNAKGVTLLQAETTKSLADYGDFSPSDSVRELVPKIDYTQPIEEIPLLLVQSTRFHDGEGFVIGVAFCHPLADGLAGTRFINSWAKLARGETLEPHELPYLDRTILKLQHSSTSPCFDHPELKPLPLKLGSSDINAEQSKKTSGVLLKLTPEQVQKLKKEANEEALEEGVRAYSRFEAIAGHVWRCACKARELDEKQPTVVRFNGDVRSRLVPPLPRNYFGNALAETVSPECYVGEIVSKPLSYGAQKIREATKKLRNEYIRSQMEIVLGEEQLDGIRGFFSGQGERNSFPFAGNPNLHITSWMSMPMYEADFGWGKPVFFGLAYVCAHDRAVILLGPHGDGSIIVSMHFQEAHLELFKKFFYQSL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00624 448 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 443 - -
Viun6g00624 448 Pfam Transferase family 1 445 - -
Viun6g00624 448 Gene3D - 212 447 IPR023213 -
Viun6g00624 448 Gene3D - 1 206 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00624 Viun-Chr6 16191616 16193245 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00624 2 446 Monolignol Biosynthesis Gene Families AT5G48930 36.161 1.10e-94 290