Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00606 ATGGTGTCCTCCTTGGAGTTCATAAGGCTTGCAAATTGGGTCATGAACCAGGTGCTTGTTAAATCATGTTATGGAGTAGCAAGGAAAATAAAAAGCCATGGTTTTGATTGGGGTGATCTTTCATCTAAACCATTGCAACAACCTTCCTCATTCCCTGATATTGTGAAGTGTGATTTGGAGGGTAGAGGGTCCCAAACCCTTGCTTGTGACTTCCACAAAGTCCTCTTAAGGACTCATTCCTTCTTTCCCTATTTCATGCTGGTTGCCTTTGAAGGTGGAAGCATTTTCAGGGCATTTCTTTTGCTTTGTTCATGTCCTATACTGTTGATTCTGAACTATGAAATGAAGCTCAGAGTGATGATCTTCATCTCCTTTTGTGGACTCAAAGTGAAGGACATGGAGAACACTTCAAGGGCAGTGTTACCAAAGTTTTACTTGGAGAACCTTAATCTTGAGGCCTATGAGGTTGTGGCTTCAGTAGGGTCAAGGGTTTTCTTCACCACTATGCCTAGAGTGATGGTGGAAGGGTTTCTGAAGGAATATTTGAATGCTGATGCTGTTATAGCCACTGAGTTGCACACTTCTGGTTTTTACTTCACTGGTTTGGTTTCTAAGTCTGGTTTTCTTGTGAAGCACAGTGCCCTCATAGATTATTTTGGAGATACAAAACCTGACCTTGGCATTGGTAACACAAGCCTTCATGATCAACTTTTTATTTCTCTTTGCAAGGAGGCTTATGTGGTGATGAATGAGGGAAAAGTGATGCCAAGGAACAAGTATCCAAAGTCCTTAATATTTCATGATGGAAGACTTGCATTCTTGCCTACTCCTTCAGCAACCCTCTGCATGTTCATGTGGCTTCCAATTGGGTTTGTGATGGCCATTTACAGAATCTTTCTGGGTGTGTTCCTTTGCTGCAAATTCACAGTGGCATTAGGAGCGTGGTGTGGGTTGAAATTTGATTTCAAGGACAAAAACCAGAAAAGATCAGAGTCAGATAAAGGGGTGCTTTATGTCTGCACTCACAGGACTCTCTTGGATCCAATTTTTCTGAGCTCAGGTTTGGGGAGGCCTTTGACAGCAGTGACCTACAGTTTAAGCAGGGTGTCTGAGTTTCTGGCCCCTCTTAGGACCATAGGACTCACAAGGGACAGAAAAGAAGATGGAGAAACCATGAAGAGGTTGCTTGGTGAAGGGGATTTGGTGGTGTTTCCCGAAGGAACAACTTGTAGGGAACCCTATCTGTTAAGGTTCAGTTCCTTGTTTGCAGAACTGGCTGATGAGATTGTGCCTGTGGCTGTGAATGTTGAAGTGAGCATGTTCTATGGGACCACAGCAAGTGGCCTGAAGGTGTTTGATCCATTTTTCTTTTTCATGAACCCTAACCCAAAATATTGCATTGAGATCCTTGAAAAGGTTCCCAGAGAACACACTTGTGGTGGGGGAAGGTCTAGTCATGAAGTGGCAAATCATATACAGAAAGAGTTAGGGTATGCTTTGGGATTTGAGTGCACCAACCTTACAAGGAGGGATAAATATATGATGCTTGCTGGGAATGAAGGGGTTGTTCAAGAAAAGAAGGGGAGAAGATTCTGA 1596 0.4317 MVSSLEFIRLANWVMNQVLVKSCYGVARKIKSHGFDWGDLSSKPLQQPSSFPDIVKCDLEGRGSQTLACDFHKVLLRTHSFFPYFMLVAFEGGSIFRAFLLLCSCPILLILNYEMKLRVMIFISFCGLKVKDMENTSRAVLPKFYLENLNLEAYEVVASVGSRVFFTTMPRVMVEGFLKEYLNADAVIATELHTSGFYFTGLVSKSGFLVKHSALIDYFGDTKPDLGIGNTSLHDQLFISLCKEAYVVMNEGKVMPRNKYPKSLIFHDGRLAFLPTPSATLCMFMWLPIGFVMAIYRIFLGVFLCCKFTVALGAWCGLKFDFKDKNQKRSESDKGVLYVCTHRTLLDPIFLSSGLGRPLTAVTYSLSRVSEFLAPLRTIGLTRDRKEDGETMKRLLGEGDLVVFPEGTTCREPYLLRFSSLFAELADEIVPVAVNVEVSMFYGTTASGLKVFDPFFFFMNPNPKYCIEILEKVPREHTCGGGRSSHEVANHIQKELGYALGFECTNLTRRDKYMMLAGNEGVVQEKKGRRF 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00606 531 CDD LPLAT 321 496 - -
Viun6g00606 531 SMART plsc_2 336 437 IPR002123 GO:0016746
Viun6g00606 531 Pfam Acyltransferase 325 429 IPR002123 GO:0016746
Viun6g00606 531 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 259 524 - -
Viun6g00606 531 PANTHER ANCIENT UBIQUITOUS PROTEIN 65 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00606 Viun-Chr6 16026681 16029737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00606 10 524 Acyl Lipid Metabolism Gene Families AT1G06520 55.035 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00606 K13508 - gmx:100802208 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g00606 6 16026681 16029737 Viun8g02865 8 36603462 36606121 PCT
Viun8g02733 8 36045709 36048107 Viun6g00606 6 16026681 16029737 PCT