Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00559 ATGTGTTCCAAAAATGGAGATTTTTCTGTGACTGTGACCAATGAAGAGGTGGTGGCAGCGATGTTACCAATGCAGGAACATTGGCTTCCACTCTCCAACCTTGACCTCCTTCTACCTCCATTGGATGTAGGAGTTTTCTTTTGCTACAACAACCCTATTCTCACACCCACAACCATGGAAGATTGTGCCACCAACAAAATCACCTTTGGAACCATGGTGGGGTCTCTGAAGAAGGCCTTGGCACAAACCCTAATCTCTTATTATGTGTTAGCAGGTGAAGTGGTGCTCAACAATATGGGTGAACCTGAAGTTCTCTGTAACAATCGTGGTGTTGATTTTGTTGAAGCTGAAACAGACATTGAACTCAAGAACCTCAACTTTCACAACCCAGATCAATCTATTGAAGGCAAGTTTGTCCCGAAGAAGAAAAATGGTGTACTTGCTGTCCAGGCAACATCACTGAAGTGCGGTGGAATAGTTGTAGCGTGTTCATTTGATCATCGCATTGCAGATGGGTATTCAGCAAACATGTTTCTGACATCATGGGCCGAGATGGCCAAGCCCACCAAGCCCACAACTATGAGCCCATGTTTCCATCGGTCCCTCTTCACTCCTCGTCGTCCATGTTCTGTTCCTCATTCCCTTCACCAAATGTACACCCCCATTTCCAAGCTCACCCCTGCACAAACCGCAACCACCCCTCTGTTCAGTCGCATATACTACGTAACTGCGGAGAAGCTTGACAGCATGCAAGCCCTTGCGAGTGGCAATGGCGGAAAACGAACGAAGCTGGAGAGTGTGTGCGCGTTGTTGTGGAAGATGGTTGCACGTGCGGCTTCAAGAGAGGGGAGGGGCGAAAGGACGGTGGCGAAAGTGGGGGTTGTGGTTGATGGAAGGAGAAGACTGTGGAAAAGAGAGAAAGCGAAGGAAGCGATGATGGGGAGTTACTTCGGGAACGTGCTTTCGATACCCTTTGGAGAGAAGGTGGTGGAGGAGTTGATGGAGAAGCCGTTAGGGTTTGTGGCCGATGCGGTTCACGAGTTGTTGGCGGAGGCGACGACGGAGGAGCATTTTCTGGGGCTGGTTGATTGGGTGGAGGGTCATAGACCGGAGGGAGGGGTGGCAAGGATATACTGTGATGGAAGTGAAGGAGGGAAGTTTGTGGTGTCTTGTGGGCAAAGGTTTTTGGAGGGGAAGATGGATTTTGGGTGGGGGAAGGTTGTGTTTGGGTCATTCCATTTTCCTTGGGGTGGTGAAGCTGGTTATGTTATGCCGATGAAGAGTCCTTTAGGGAATGGTGATTGGGTTGTTTACATGCATCTTACCAAGGAGCAATTGGAAGTGATAGAGTGTGAGGCTAGTGATGTTTTTAGACCCATAACTTGGGATTACCTTAACCCTAGACCTCTCTCTTAG 1416 0.4894 MCSKNGDFSVTVTNEEVVAAMLPMQEHWLPLSNLDLLLPPLDVGVFFCYNNPILTPTTMEDCATNKITFGTMVGSLKKALAQTLISYYVLAGEVVLNNMGEPEVLCNNRGVDFVEAETDIELKNLNFHNPDQSIEGKFVPKKKNGVLAVQATSLKCGGIVVACSFDHRIADGYSANMFLTSWAEMAKPTKPTTMSPCFHRSLFTPRRPCSVPHSLHQMYTPISKLTPAQTATTPLFSRIYYVTAEKLDSMQALASGNGGKRTKLESVCALLWKMVARAASREGRGERTVAKVGVVVDGRRRLWKREKAKEAMMGSYFGNVLSIPFGEKVVEELMEKPLGFVADAVHELLAEATTEEHFLGLVDWVEGHRPEGGVARIYCDGSEGGKFVVSCGQRFLEGKMDFGWGKVVFGSFHFPWGGEAGYVMPMKSPLGNGDWVVYMHLTKEQLEVIECEASDVFRPITWDYLNPRPLS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00559 471 Pfam Transferase family 8 454 - -
Viun6g00559 471 Gene3D - 221 451 IPR023213 -
Viun6g00559 471 Gene3D - 7 220 IPR023213 -
Viun6g00559 471 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00559 Viun-Chr6 14884590 14886834 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00559 32 450 Monolignol Biosynthesis Gene Families AT5G48930 24.771 4.25e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00559 - - gmx:100777149 691.804