Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00558 ATGTGTGCTGAAAATGGAGATTTTTCTGTTCATGTCACCAATGAAGAGGTGGTGGCTGCACTGTTACCAATGCAAGAACATTGGCTTCCACTCTCCAACCTTGACCTGCTTTTACCTCCGGTGGATGTGGGAATTTTCTTTTGCTACAACAACCCTATTCTCACATCCACAACCATGGAAGATTGTGCCACCAACAAAATGATTTTTGGAACCATGGTGGGGTCTTTGAAAAAGGCCTTGGCACAAACCCTAATCTCTTATTATGTGTTAGCAGGTGAAGTGGTGCTCAACAATATGGGTGAACCTGAAGTTCTCTGTAACAATCGTGGTGTTGATTTTCTTGAAGCTGAAGCAGACATTGAACTCAAGAACCTCAACTTTTACAACCCAGATCAATCTATTGAAGGCAAGTTTGTTCCAAAGAAGAAAAATGGTGTGCTTGTTGTCCAGACAACAGCACTGAAATGTGGAGGAATAATAGTAGCATGCACATTTGATCATCGCATAGCAGATGCATATTCAACAAACATGTTTCTTGTTTCATGGGCTGCCATGGCCAACCCCACCACTACCATTCTCGCCGCCACTTCCTGCCACCCATGTTTCCGCCGCTCCCTCCTCAGCCCACGCCGTCCAGGTTCCATCCACCCTTCTCTGCACCAAATGTACACTTCCATCTCCCACCTCCCTCCCCCTCCCACCACCGCCGGCACCACTCTCCTCAGCCGCATATACTACGTCACGGCGGAGCAGCTTCAGCACATGCAGTCCCTCGCCGCCACGCGCACGAAGCTGGAGTGTTTCTCCGCATTCTTATGGAAGATGGTTGCACGTGCAGCTTCACGAGACACAAATAGTAAAAGGGTTACTGCCAAAATGGGCATTGTGGTTGATGGAAGGAAGAGACTGGGCAATGGTGACAAAGAGAGCGAAGCAATGATGGAGTGTTACTTTGGGAACGTGCTTTCCATACCCTTTGGAGGGAAACTGGTGGAGGAGTTGGTGAAGGAGCCGTTAGGGTATGTGGTGGAGGCTGTTCACGAGTTTTTGGCGGCGGCGGCCACGGAGGAGCACTTCTTAGGACTCATTGATTGGGTGGAGGCTAAGAGGCCGATTCCTGGAGTGTCCAGAATTTACTGTAACCGTGCCGACGAGGGACCGGCGTTTGTGGTGTCGTCCGGTCAGAGGTTTCCGGTGGAGAAGGTGGATTTTGGGTGGGGGAAAGCGGTGTTTGCATCGTACCATTTTCCTTGGGGTGGTGAAGCTGGTTATGTTATGCCAATGCCAAGTCCTCTGGGGAATGGTGATTGGGTTGTTTACATGCACCTTGCAGAGAAGCACCTGGACATCATAGAGACTGAAGCTGCTCATGTGTTTAAGCCCTTGACTTGGGACTACCTTATGCAATAA 1410 0.4957 MCAENGDFSVHVTNEEVVAALLPMQEHWLPLSNLDLLLPPVDVGIFFCYNNPILTSTTMEDCATNKMIFGTMVGSLKKALAQTLISYYVLAGEVVLNNMGEPEVLCNNRGVDFLEAEADIELKNLNFYNPDQSIEGKFVPKKKNGVLVVQTTALKCGGIIVACTFDHRIADAYSTNMFLVSWAAMANPTTTILAATSCHPCFRRSLLSPRRPGSIHPSLHQMYTSISHLPPPPTTAGTTLLSRIYYVTAEQLQHMQSLAATRTKLECFSAFLWKMVARAASRDTNSKRVTAKMGIVVDGRKRLGNGDKESEAMMECYFGNVLSIPFGGKLVEELVKEPLGYVVEAVHEFLAAAATEEHFLGLIDWVEAKRPIPGVSRIYCNRADEGPAFVVSSGQRFPVEKVDFGWGKAVFASYHFPWGGEAGYVMPMPSPLGNGDWVVYMHLAEKHLDIIETEAAHVFKPLTWDYLMQ 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00558 469 Gene3D - 224 453 IPR023213 -
Viun6g00558 469 Pfam Transferase family 9 456 - -
Viun6g00558 469 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 430 - -
Viun6g00558 469 Gene3D - 7 223 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00558 Viun-Chr6 14845906 14850347 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00558 76 452 Monolignol Biosynthesis Gene Families AT5G48930 24.242 6.32e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00558 - - gmx:100785067 749.969