Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00557 ATGTGTGACGAAAACGGAGATTTTTCTGTGAGTGTGACCAATGAAGAGGTGGTGGCAGCAGTGTTACCAATGCAGGAACATTGGCTTCCACTCTCCAACCTTGACCTCCTTCTACCTCCATTGGATGTAGGAGTTTTCTTTTGCTACAACAACCCTATTCTCACATCCACAACCATGGAAGATTGTGCCACCCACAAAATCACCTTTGGAACCATGGTGGGGTCTCTGAAGAAGGCCTTGGCACAAACCCTAATCTCTTATTACGTGTTTGCTGGTGAAGTGGTGCTCAACAGCATGGGTGAACCTGAAGTTCTCTGTAACAATCGTGGTGTTGATTTTCTTGAAGCTGAGGCAGATGTGGAACTCAAAAACCTGAACTTTTACAACCCTGATCAATCTATCGAAGGCAAGTTTGTTCCAAAGAAGAAAAATGCTTGTGTACTTGCTGTCCAGGCAACTGTACTGAAGTGTGGAGGAATAATAGTGGCATGCACATTTGATCATCGCATAGCAGATGCATATTCAACAAACATGTTTCTTGTTTCATGGGCTGCCATGGCCAACCCCAACACCACCATTCTCGCCGCCACTTCCGGCCACCCATGTTTCCGCCGCTCTCTCCTCAGCCCTCGCCGTCCAGGTTTCATCCGCCCTTCTCAGCACCACATGTACACCTCAATCTCCGACCTTCCTCCACCTCCCGCCACCGACGCCACCGCTCTCCTCAGCCGCATATACTACGTCACGGCGGAGCAGCTCCGCCACATGCAGTCCCTCGCCGCCACGCGCACGAAGCTGGAGTGTTTCTGTGCGTTCTTATGGAAGATGGTTGCGCATGCAGCTTCAAGAGACACATACAGTAAAAGGGCTACTGCCAAAATGGGCATTGTGATTGATGGAAGGAAGAGACTGGGCAACGGTGACAAAGAGAGCGAAGCAATGATGGAGTGTTACTTTGGGAACGTGCTTTCCATACCCTTTGGAGTTAAACTGGTGGAGCAGTTGGTGAAGGAGCCGTTAGGGTATGTGGTGGAGGCTGTTCACGAGTTTTTGGCGGCGGCGGCCACGGAGGAGCACTTCTTAGGACTAATTGATTGGGTGGAGGCTAAGAGGCCGATTCCTGGAGTGTCCAGAATTTACTGTAACCGTGCCGACGAGGGACCGGCCTTTGTGGTGTCGTCCGGTCAGAGGTTTCCGGTGGAGAAGGTGGATTTTGGGTGGGGGAAAGCGGTGTTTGCATCGTACCATTTTCCTTGGGGTGGTGAAGCTGGTTATGTTATGCCAATGCCAAGTCCTCTGGGGAATGGTGATTGGGTTGTTTACATGCACCTTGCAAAGAAGCACTTGGAAATCATGGAGACTGAAGCTGCTCATGTGTTTAAGCCCTTAACTTGGGATTACCTTAACCAATAA 1413 0.5025 MCDENGDFSVSVTNEEVVAAVLPMQEHWLPLSNLDLLLPPLDVGVFFCYNNPILTSTTMEDCATHKITFGTMVGSLKKALAQTLISYYVFAGEVVLNSMGEPEVLCNNRGVDFLEAEADVELKNLNFYNPDQSIEGKFVPKKKNACVLAVQATVLKCGGIIVACTFDHRIADAYSTNMFLVSWAAMANPNTTILAATSGHPCFRRSLLSPRRPGFIRPSQHHMYTSISDLPPPPATDATALLSRIYYVTAEQLRHMQSLAATRTKLECFCAFLWKMVAHAASRDTYSKRATAKMGIVIDGRKRLGNGDKESEAMMECYFGNVLSIPFGVKLVEQLVKEPLGYVVEAVHEFLAAAATEEHFLGLIDWVEAKRPIPGVSRIYCNRADEGPAFVVSSGQRFPVEKVDFGWGKAVFASYHFPWGGEAGYVMPMPSPLGNGDWVVYMHLAKKHLEIMETEAAHVFKPLTWDYLNQ 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00557 470 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 431 - -
Viun6g00557 470 Pfam Transferase family 9 457 - -
Viun6g00557 470 Gene3D - 7 224 IPR023213 -
Viun6g00557 470 Gene3D - 225 455 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00557 Viun-Chr6 14820831 14824028 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00557 76 453 Monolignol Biosynthesis Gene Families AT5G48930 24.051 2.96e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00557 - - gmx:100785067 733.406