Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00548 ATGGTAACCATCAAAGCTTCTTACATAGTAGTTCCAAATGAACCAACTCCAGAGGGTTTTCAATGGCTGTCTGAGCCTGATCAAGTGGCGCGTCAGAGCCACACCCCCACCATCTACGTTTACAATGCAAAGCACAACCATGACGCATTAGTTGAACGCATAAGAAACTCTCTTAGCAAGATTTTGTGTTACTACTACCCAGTGGCTGGTAGATTGAGAAAGTTAGAAGAAGGTGGCAGATTGGAATTGAATTGTAATGCAAAAGGAGCGGTGTTGATTGATGCAGAATCCACAAAAACAGTGCATGATTATGGTGACTTTATGGGTGACTCCGCCAAGGACTTGGTTCCAAAAGTTGAGTACACAAACACCCCAATTGAGGAACTTCCCTTGTTAGTAGTGCAAGTAACAAGTTTCCTTGGCGATGAAGCGTTTTCCATTGGAGTTGCTATATCTCATACTTTGTCAGATGGTGTTGCTTCCATTCAGTTCATCAACTCATGGGCAAAGTTGGCTCGTGGAGAGACATTAGAGCCTCATGAAATGCCCTTTTTGGACCGAACTGTGCTAAAATTCACAGAGCCTCCACAATCCCCACGCTTTGAACACCAAGAGTTCAAGCCTTTGCCTCTCATATTAGGAAGAAGTGACACCACTATTGAGAAAAGCAAGAGGGTAGAAGCCATGACGTTGAAGCTGACGGCAGAACAAGTGGAGAAGCTGAAGAACAAGGCCAATGCTGATAAATCAAGAGAAGGGTCAAGACCTTATAGCAGATTTGAGGCTATTGGGGCACATGTATGGAGATGTGCGTCTAAGGCTCGTGGATTAGATGAGAATCAACCAACTCTGCTTCGCTTCAATGCTGATATTCGCAGTAGAGTAATTCCACCTCTCCCTAGGAATTACTTTGGGAATGCTTTGGTCTTAAAAACTGCATCATCACGCGCTGGAGAAATCTTATCAAATTCTTTGGGTCATGCAGCTCAAAAAATAAGGGAAGCAGTTGAAGAACTCACATATGAGTATATAAAATCACAGATTGACCTCATTAGAAGTCAGGACGATATGGATGAAGCAAGGGCTTTGTCCTTTGGAATAAATGAAGGTAAGGATGCAGTGTTTGTTGGGAACCCTAACCTTCGTATTACAAGTTGGCTGAGTATGTCGATGAACGAAGCAGATTTTGGTTTGGGAAAGCCTATCTATTTAGGTCTAGCAGGTGGGACTGTACAAGAGAGGGCATTGATTACCCATAGTCCGGATGCTGATGCCTCTATTTTTCTGTTTCTACACTTTCAAATGGAGCATATTCAGCTTTTCAAGAACTATTTCTATGATGAAATATAA 1350 0.4267 MVTIKASYIVVPNEPTPEGFQWLSEPDQVARQSHTPTIYVYNAKHNHDALVERIRNSLSKILCYYYPVAGRLRKLEEGGRLELNCNAKGAVLIDAESTKTVHDYGDFMGDSAKDLVPKVEYTNTPIEELPLLVVQVTSFLGDEAFSIGVAISHTLSDGVASIQFINSWAKLARGETLEPHEMPFLDRTVLKFTEPPQSPRFEHQEFKPLPLILGRSDTTIEKSKRVEAMTLKLTAEQVEKLKNKANADKSREGSRPYSRFEAIGAHVWRCASKARGLDENQPTLLRFNADIRSRVIPPLPRNYFGNALVLKTASSRAGEILSNSLGHAAQKIREAVEELTYEYIKSQIDLIRSQDDMDEARALSFGINEGKDAVFVGNPNLRITSWLSMSMNEADFGLGKPIYLGLAGGTVQERALITHSPDADASIFLFLHFQMEHIQLFKNYFYDEI 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00548 449 Gene3D - 215 448 IPR023213 -
Viun6g00548 449 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 443 - -
Viun6g00548 449 Gene3D - 1 208 IPR023213 -
Viun6g00548 449 Pfam Transferase family 1 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00548 Viun-Chr6 14523820 14526145 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00548 2 447 Monolignol Biosynthesis Gene Families AT5G48930 35.111 5.87e-85 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00548 K13065 - gmx:100778626 660.218