Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00547 ATGGTAAGCATCAAAGCTTCTTACACAGTGGTTCCAAATGAAGCAACTCCAGAGGGTATTGAATGGCTCTCTGATATTGATCAAGTGGCGCGTCTGTGCCATACACAGACCATCTATGTTTTCCATGCAAAGCACAACCTTGACGCATTAGTCCAACAGATGAGAAACTCTCTTAGCAAGATTTTGTGCATTTACTATCCATTGGCTGGTAGATTGAGAAGATTAGAAGAAGGTGGCAGATGGGAAGTGGATTGTAATGCAAAAGGAGCCATGTTGTTTGAAGCAGAATCCACAAAAACAGTGAACTATTATGGTGACTTTTTGGGTGACTCCGCCAATGACTTGGTTCCAAAAGTCAATTACACAAACACTTTAATTCAGGATATTCCTTTGTTACTAGTGCAAGTAACAAGCTTCCTTGGCAATGAAGCATTTTCCATTGGAGTTGTTGTATCTCATATTTTGTTTGATGGTATTTCTGCCATTCACTTCATCAACTCATGGGCAAAGTTGGCTCGTGGAGACACATTAGAGTCTCATGAAATGCCATTTCTGGATCGAACTGTGCTAAAGTTCACAGCCCCTCCACCACCCCCACGCTTTGATCACCAAGAGTTCAAGCCTATGCCTCTCATATTAGGAAGAAGTGACAACACTGTTGAGAAAAACAAGAGGGTAAGTGCCATTTCGTTGAAGCTTACAACAGAACAAGTGGGGAAGTTGAAGAACAAGGCCAATGCTGATGGATCAACAAAAGGGTCACGACCTTATAGTAGATTTGAAGCTATTGCTGCACATGTATGGAGATCTGCATCTAAGGCTCGTGGATTAGATGAGAATCAACCAACTCTCCTTCGGTTCAGTGGTGATATTCGCAATAGACTCATTCCACCTCTCCCTAGGAATTACATTGGAAATGCTTTGTCCATAGTATCAGTATCATCGCACGTTGGAGAAATCTTATCATCTCCTTTGGGTCATGTTGCTCAGAAAATAAGGGAAGCTGTTGAAATGATTACACATGAGTTTATATGCTCACAGATAGATGTGATTAGAGGTCAGGAGCATGTGAATAAAGCGAGAACTTTGTACTATGGAGCAAATGAAGGTAAGGATGTATTATTTTTTGGAAACCCTAACCTACGCATCACAAGTTGGCTTAGTATGCCGATGCATGAAGCAAATTTTGGTTGGGGAAAGCCTGTGTATTCAGGTCTGGCAGGTAAAGCTGCACAAGAGAGGGCAGTGATTACCCAAAGTCCAGATGGTGATGGCTCTGTTATTCTTGTTCTACACTTTCAAGTGGAACATATGGAGCTTTTCAAGAACTATTTCTATGAAGAAATCTAA 1350 0.4141 MVSIKASYTVVPNEATPEGIEWLSDIDQVARLCHTQTIYVFHAKHNLDALVQQMRNSLSKILCIYYPLAGRLRRLEEGGRWEVDCNAKGAMLFEAESTKTVNYYGDFLGDSANDLVPKVNYTNTLIQDIPLLLVQVTSFLGNEAFSIGVVVSHILFDGISAIHFINSWAKLARGDTLESHEMPFLDRTVLKFTAPPPPPRFDHQEFKPMPLILGRSDNTVEKNKRVSAISLKLTTEQVGKLKNKANADGSTKGSRPYSRFEAIAAHVWRSASKARGLDENQPTLLRFSGDIRNRLIPPLPRNYIGNALSIVSVSSHVGEILSSPLGHVAQKIREAVEMITHEFICSQIDVIRGQEHVNKARTLYYGANEGKDVLFFGNPNLRITSWLSMPMHEANFGWGKPVYSGLAGKAAQERAVITQSPDGDGSVILVLHFQVEHMELFKNYFYEEI 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00547 449 Pfam Transferase family 1 446 - -
Viun6g00547 449 Gene3D - 1 208 IPR023213 -
Viun6g00547 449 Gene3D - 215 448 IPR023213 -
Viun6g00547 449 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00547 Viun-Chr6 14511035 14515167 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00547 2 447 Monolignol Biosynthesis Gene Families AT5G48930 35.556 6.86e-86 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00547 K13065 - gmx:100778626 656.751