Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00543 ATGGTAACCATCAAAGGTTCTTACACAGTAGTTCCAAATGAACCAACTCCAGAGGGTTTTCAATGGCTGTCTGAGCCTGATCAAGTGGCGCCTAATAGCCACACCCCCACCCTCTACGTTTACAATGCAAAGCACAACCATGACGCATTAGTTGAACACATAAGAAACTCTCTTAGCAAGATTCTGTGTTACTACTATCCAGTGGCTGGTAGATTGAGAAAGTTAAAAGAACGTGGCAGATTGGAATTGAATTGTAATGCAAAAGGAGCGGTGTTGATTGATGCAGAATCCACAAAAACAGTGCATGATTATGGTGACTTTATGGGTGACTCCGCCAAGGACTTGGTTCCAAAAGTTGATAATAGAAACACTCCAATAGAGGAACTTCCCTTGTTAGTAGTGCAAGTAACAAGTTTCCTTGGCGATGAAGCGTTTTCCATTGGAGTTGCTCTATTGCATACTTTGTCTGATGGTGTTGCTTCCATTCAGTTCATCAACTCATGGGCAAAGTTGGCTCGTGGAGAGACATTAGAGCCTCATGAAATGCCCTTTTTGGACCGAACTGTGCTAAAATTCACAGAGCCTCCATCACCCCCTCGCTTTGAACACCAAGAGTTCAAGCCTTTGCCTCTCATATTAGGAAGAAGTGACACCACTATTGAGAAAAGCAAGAGGGTAGAAGCCATCACGTTGAAGCTGACAGCAGAACAAGTGGGGAAGTTGAAGAACAAAGCCAATGCTGATAAATCAAGAGAAGGGTCAAGACCTTATAGCAGATTTGAGGTTATTAGTGGACATGTATGGAGATGTGCATCTAAGGCTCGTGGATTAGACGAGAATCAACCAATTCTGCTTCGGTTTATTGCTAGTATTCGCAGTAGAGTAATTCCACCTCTCCCTAGGAATTACTTTGGGAATGCTTTGGTCTTAAAAACTGCATCATCACGCGTTGGAGACATCTTATCAAATTCTTTGGGTCATGCTGCTCAGAAAATAAGAGAAGCAGTTGAAGAACTTACATATGACTATATAAGATCACAGATTGATATCGTAAGAGGTGAGGAAGATATCGATAAAGCAAGGGCTTTGTACTATGGACCAAAAGAAGGGAAGGATGTATTCTTTTTTGGGAATCCTAACCTGCGTATTACAAGTTGGCTGAGTATGCCAATGAATGAAACAGATTTTGGTTGGGGAAAGCCTCTGTATTCGGGTCTGGCAGGTGGAGTTGCACAAGAAAGGGCATTGATTACCCAAAGTCCAGGCGGTGATGGCTCAGTTATTCTATTTCTACACTTTCAAGCGGAACATATGGAGCTTTTCAAGAACTATTTCTATGAAGAAATATAA 1350 0.4207 MVTIKGSYTVVPNEPTPEGFQWLSEPDQVAPNSHTPTLYVYNAKHNHDALVEHIRNSLSKILCYYYPVAGRLRKLKERGRLELNCNAKGAVLIDAESTKTVHDYGDFMGDSAKDLVPKVDNRNTPIEELPLLVVQVTSFLGDEAFSIGVALLHTLSDGVASIQFINSWAKLARGETLEPHEMPFLDRTVLKFTEPPSPPRFEHQEFKPLPLILGRSDTTIEKSKRVEAITLKLTAEQVGKLKNKANADKSREGSRPYSRFEVISGHVWRCASKARGLDENQPILLRFIASIRSRVIPPLPRNYFGNALVLKTASSRVGDILSNSLGHAAQKIREAVEELTYDYIRSQIDIVRGEEDIDKARALYYGPKEGKDVFFFGNPNLRITSWLSMPMNETDFGWGKPLYSGLAGGVAQERALITQSPGGDGSVILFLHFQAEHMELFKNYFYEEI 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00543 449 Pfam Transferase family 1 446 - -
Viun6g00543 449 Gene3D - 215 448 IPR023213 -
Viun6g00543 449 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 443 - -
Viun6g00543 449 Gene3D - 1 208 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00543 Viun-Chr6 14292370 14294214 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00543 2 447 Monolignol Biosynthesis Gene Families AT5G48930 35.778 1.07e-86 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00543 K13065 - gmx:100778626 657.136