Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00533 ATGGGTGGGCAATCTGTGCATGTGCTTAATGCACTGGATGTTGCAAAGACACAATGGTATCATTTCACAGCAATTGTGATAGCTGGAATGGGATTCTTCACCGATTCTTATGACCTGTTCTGCATATCCCTCGTCACCAAATTACTTGGCCGCATATACTACACTGAAGGCTATGATAAACCAGGTTCTCTGCCGGCAAATGTTTCAGCTGCCATCAATGGTGTCGCATTCTGTGGATCTCTTGCAGGCCAACTTTTCTTTGGGTGGCTTGGTGACAAGATGGGAAGGAAGCGTGTGTACGGGATGACCCTTATGCTCATGGTAATAAGCTCAATCGCTTCTGGTCTTTCCTTTGGCAAAGACCCTAAAGCTGTCATGGCTACCCTTTGTTTCTTCCGCTTCTGGCTTGGATTTGGCATTGGTGGAGACTACCCTCTTTCCGCCACCATCATGGCCGAGTATGCAAACAAGAAGACTCGTGGAGCATTCATAGCTGCTGTTTTTGCCATGCAAGGTTTTGGAATTTTGGCTGGTGGCGTGGTTGCAATAGTAGTATCAGCTATTTTCAGTGCCCTCTACCCTTCTCCAACATTCCAGGTCAACCCAATTCTGTCCACAGTGCCACAAGCTGATTATGTTTGGAGGATGATCTTGATGTTCGGTGCAATCCCAGCTGTGATCACATACTATTGGCGCATGAAAATGCCTGAGACCGCCAGATACACTGCCTTGGTTGCCAAGAATACCAAGCAAGCTGCTGCAGATATGTCAAAGGTGTTGCAGGTTGAGATAGAAGCTGAAGCAGAGAAAGTTGAGGAATTGGAGGGAAGAAGAGAAAGGGGAAATGAGTTTGGCCTGTTCACAAAACAGTTCCTTCTACGCCATGGACTTCACCTTGTTGGAACAGCCAGTACTTGGTTCCTGTTGGACATTGCCTATTACAGTCAGAATCTTTTTCAGAAAGACATTTTCAGTGCTATTGGTTGGATTCCTGCAGCAAAAACCATGAATGCCATTGAAGAGGTTTACAAGATTGCAAGAGCACAGACCCTGATAGCTCTTTGTAGTACTGTCCCTGGTTACTGGTTCACAGTGGCACTGATTGATAGGATGGGCAGGTTTACGATCCAGTTGATGGGGTTTTTCTTTATGACTGTCTTCATGCTTGCCTTAGCCATTCCATACCACCACTGGACCATGAGCGGTAACCAAATTGGGTTTGTTGTCATATATTCATTGACCTTCTTCTTTGCCAATTTTGGTCCAAATGCCACAACATTTGTGGTGCCAGCTGAGATTTTCCCTGCAAGGCTGAGGTCAACATGTCATGGCATATCAGCTGCAGCTGGCAAAGCTGGGGCAATGGTAGGCGCTTTTGGCTTCCTCTATGCTCAAAACGCCATTGGACTCAGGAATACACTTATTATTTTGTCTGCCATTAACTTCTTCGGCTTTCTCTTTACCTTTCTCATTCCTGAATCTAAAGGCAAATCGTTGGAGGAGATGTCTGGTGAAGCTGAACAAAACGATACTCCCGCAACAGCATCACCGATGGAAGCCGGTCTTGAAGTCAGAACATCTGTCTAA 1587 0.4594 MGGQSVHVLNALDVAKTQWYHFTAIVIAGMGFFTDSYDLFCISLVTKLLGRIYYTEGYDKPGSLPANVSAAINGVAFCGSLAGQLFFGWLGDKMGRKRVYGMTLMLMVISSIASGLSFGKDPKAVMATLCFFRFWLGFGIGGDYPLSATIMAEYANKKTRGAFIAAVFAMQGFGILAGGVVAIVVSAIFSALYPSPTFQVNPILSTVPQADYVWRMILMFGAIPAVITYYWRMKMPETARYTALVAKNTKQAAADMSKVLQVEIEAEAEKVEELEGRRERGNEFGLFTKQFLLRHGLHLVGTASTWFLLDIAYYSQNLFQKDIFSAIGWIPAAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDRMGRFTIQLMGFFFMTVFMLALAIPYHHWTMSGNQIGFVVIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAMVGAFGFLYAQNAIGLRNTLIILSAINFFGFLFTFLIPESKGKSLEEMSGEAEQNDTPATASPMEAGLEVRTSV 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00533 528 CDD MFS_PhT 25 495 - -
Viun6g00533 528 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 499 - -
Viun6g00533 528 NCBIfam phosphate:H+ symporter 11 505 IPR004738 GO:0005315|GO:0006817|GO:0016020
Viun6g00533 528 Gene3D MFS general substrate transporter like domains 20 265 IPR036259 -
Viun6g00533 528 Gene3D MFS general substrate transporter like domains 277 518 IPR036259 -
Viun6g00533 528 Coils Coil 257 277 - -
Viun6g00533 528 FunFam Inorganic phosphate transporter 1-6 20 516 - -
Viun6g00533 528 MobiDBLite consensus disorder prediction 500 528 - -
Viun6g00533 528 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 496 IPR020846 GO:0022857
Viun6g00533 528 Pfam Sugar (and other) transporter 25 503 IPR005828 GO:0016020|GO:0022857|GO:0055085
Viun6g00533 528 SUPERFAMILY MFS general substrate transporter 12 503 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00533 Viun-Chr6 13963677 13965278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00533 1 510 Inorganic Solute Cotransporters AT3G54700 76.527 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00533 K08176 - gmx:100792711 900.197