Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00474 ATGGTGGTGAAGGTTTATGGAGATTATGCTAACCCTAAGAGGGTGATAGTGTGTCTGATTGAGAAGGAAGTTGAGTTTGAAATAGTCCATGTTGATGGCCTTAAGGGGGAGAATAAACTGCCAGAGTACCTTAAGTTGCAGCCCTTTGGATTGCTTCCTGTTGTTAAAGATGGTGACTACATCCTTTATGAATCAAGGGCAATACTTAGATACTATTCAGAAAAGTACAAAAACCAAGGGAGTGCTTTATTGGGAAACACAATAGAAGAGAGGGGTGTTGTGGAGCAATGGCTTGAAGTTGAAGCTCATAACTATGACCCTCCAATCTACAACTTGGTGATGAATATTTTGGCTTTGCCATTAGTAAAGGGTGAAGCAGAAGATCCAAAGGTTACTAAAGAAAATGAAGAAAAGCTAGGGAAGGTGCTTGACATTTATGAGGAGAGACTATCCCACACAAAGTACCTTGCAGGGGATTTCTTCAGCCTTGCTGACCTTAGTCATCTTCCATTTACCCATTTATTGATGAATCATATGAAGAAAGGGTATATGATTAGAGAAAGGAAGCATGTGAGTGCTTGGTGGGATGCTATTAGTAATAGACCATCCTGGAAGAAGGTTCTTCAACTATACAAATGA 639 0.4006 MVVKVYGDYANPKRVIVCLIEKEVEFEIVHVDGLKGENKLPEYLKLQPFGLLPVVKDGDYILYESRAILRYYSEKYKNQGSALLGNTIEERGVVEQWLEVEAHNYDPPIYNLVMNILALPLVKGEAEDPKVTKENEEKLGKVLDIYEERLSHTKYLAGDFFSLADLSHLPFTHLLMNHMKKGYMIRERKHVSAWWDAISNRPSWKKVLQLYK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00474 212 SUPERFAMILY Thioredoxin-like 3 80 IPR036249 -
Viun6g00474 212 Pfam Glutathione S-transferase, N-terminal domain 1 71 IPR004045 -
Viun6g00474 212 Gene3D - 85 208 - -
Viun6g00474 212 SFLD Glutathione Transferase (cytosolic) 10 201 IPR040079 -
Viun6g00474 212 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 209 - -
Viun6g00474 212 Pfam Glutathione S-transferase, C-terminal domain 110 202 IPR004046 -
Viun6g00474 212 FunFam Glutathione S-transferase F2 85 208 - -
Viun6g00474 212 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Viun6g00474 212 CDD GST_C_Phi 89 208 IPR034347 -
Viun6g00474 212 Gene3D Glutaredoxin 2 84 - -
Viun6g00474 212 SUPERFAMILY GST C-terminal domain-like 77 208 IPR036282 -
Viun6g00474 212 SFLD Main (cytGST) 10 201 - -
Viun6g00474 212 FunFam Glutathione S-transferase F2 2 84 - -
Viun6g00474 212 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 212 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00474 Viun-Chr6 12438066 12443390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00474 1 211 Glutathione S-transferase Gene Family AT2G30870 57.547 8.22e-86 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00474 K00799 - gmx:100809406 368.237