Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00468 ATGAAGCCATCCAGAAGGAAGCCCGTGGGTAGGCCTCCAGGCTCAAGGAACAAGTCAGGCTTCAGCCCTCAACCAGTGCCCCAATCTCTGGAGCCCTCCATGAAGGTGTTTTCTTTTAGGGTACCCCCAAATAGGGACATCATGGACTTCATCTTGAACATTGCTCATAATGGTCATGTGAGTGTGGCCATCATTAGTGCCTCTGGCACAGTTAACAATGTGACCCTTCACAACTCAACCATGCAACATGGTCCCTTCACTTTGCTCTCCCTTTCTGGTTCCTACTTATACAACAACCTCTATACCCTTTACCCTGGAGCCACTCCTCCCTTTCCCCTATCTTTCACCATCAACCTCTCAACCCCTAATGGCCACATTTTCGGAGGTCTCATTACTGGCACCGTCATCGCCCGTGAAAATGTTAAACTCACCGTCTCCACCTTCAAGAACACTGGTATCCTCAAGTTTCCTCGAGATCTTGACAACAACCAAAACAATGACGACAACAACAACATAGGAACTATGACGACAAATGCATGA 540 0.4796 MKPSRRKPVGRPPGSRNKSGFSPQPVPQSLEPSMKVFSFRVPPNRDIMDFILNIAHNGHVSVAIISASGTVNNVTLHNSTMQHGPFTLLSLSGSYLYNNLYTLYPGATPPFPLSFTINLSTPNGHIFGGLITGTVIARENVKLTVSTFKNTGILKFPRDLDNNQNNDDNNNIGTMTTNA 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00468 179 ProSiteProfiles PPC domain profile profile. 31 170 IPR005175 -
Viun6g00468 179 MobiDBLite consensus disorder prediction 1 29 - -
Viun6g00468 179 Gene3D - 33 170 - -
Viun6g00468 179 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 5 168 IPR014476 GO:0003680
Viun6g00468 179 Pfam Plants and Prokaryotes Conserved (PCC) domain 36 149 IPR005175 -
Viun6g00468 179 SUPERFAMILY AF0104/ALDC/Ptd012-like 33 157 - -
Viun6g00468 179 CDD DUF296 35 137 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00468 Viun-Chr6 12292582 12293121 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00468 6 173 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 31.285 4.82e-20 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00468 - - vun:114188423 331.643