Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00458 ATGAATGGGCAGAAAATTAAGCGCAGAGTGGGTAAATATGAGGTAGGGAGGACCATTGGGGAGGGAACATTTGCAAAGGTGAAATTTGCAAGGAACTCTGAGACTGGGGACCCTGTGGCTCTTAAGATTCTTGACAAGGAGAAGGTTCTCAAGTATATGCTGGCTGAGCAGATCCAGCGAGAAATAGCCACAATGAAGTTGATCAAGCATCCAAATGTTGTTCAACTGTATGAGGTCATGGGGAGCAAGACAAAAATATACATTATTTTAGAGTTTGTGACTGGGGGAGAGCTTTTTCATAAAATACTAAACAGTGGACGAATGAGGGAAAAGGAAGCACGCAGATATTTCCAGCAGCTTATAAATGCCGTTGACTATTGCCATAGTAGAGGTGTCTACCACAGAGACCTGAAATTAGAGAACTTACTATTAGATTCTTTCGGGAACCTTAAAATTTCTGATTTTGGATTGAGTGCACTTTCCCAACAAGTCAGGGATGATGGACTGCTTCATACAACATGTGGAACTCCAAATTATGTTGCTCCTGAGGTCCTTAATGATGGAGGCTATGATGGGGCAGCTGCAGATTTGTGGTCATGTGGTGTGATTCTCTTTGTATTGCTTGCAGGCTACTTGCCTTTTGATGACACTAATATTCTGAACCTGTATAAAAAAATATCAGCTGCTGAATTTACTTGCCCCCCTTGGCTTTCTTTTAGTGCCAGGAAATTGATAACTAGAATCTTAAATCCCAACCCCGTGACTCGTATCACTGTATCGGAGATTCTGCGTGATGAATGGTTTAAAAAAGAATACAAACTTCCAGTTTTTGAGGAGACAAAGGAGAGAAACACTGATGACATTGAGGCCATCTTTAAAGACAGTGAAGTACACAATGTAAGAGAGAAGGAAGATCAGCCAACACCTATGAATGCATTTGAATTGATATCCTTGTCCAAAGGGCTGAACCTAGAAAACTTGTTTGACGTAGACCAGGGGTTTAAAAGAGAAATAAGGTTCACATCAAAATGCTCTGCCAATGAGATAATCAACAAGATTGAAGAAGCTGCAAAACCTCTTGGTTTTGATGTGCTGAAGAAAAATTTCAAGAAATAA 1116 0.4041 MNGQKIKRRVGKYEVGRTIGEGTFAKVKFARNSETGDPVALKILDKEKVLKYMLAEQIQREIATMKLIKHPNVVQLYEVMGSKTKIYIILEFVTGGELFHKILNSGRMREKEARRYFQQLINAVDYCHSRGVYHRDLKLENLLLDSFGNLKISDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVLNDGGYDGAAADLWSCGVILFVLLAGYLPFDDTNILNLYKKISAAEFTCPPWLSFSARKLITRILNPNPVTRITVSEILRDEWFKKEYKLPVFEETKERNTDDIEAIFKDSEVHNVREKEDQPTPMNAFELISLSKGLNLENLFDVDQGFKREIRFTSKCSANEIINKIEEAAKPLGFDVLKKNFKK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00458 371 ProSiteProfiles Protein kinase domain profile. 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g00458 371 FunFam Non-specific serine/threonine protein kinase 4 92 - -
Viun6g00458 371 FunFam Non-specific serine/threonine protein kinase 6 308 - -
Viun6g00458 371 CDD CIPK_C 311 368 - -
Viun6g00458 371 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Viun6g00458 371 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Viun6g00458 371 SUPERFAMILY Protein kinase-like (PK-like) 9 282 IPR011009 -
Viun6g00458 371 Gene3D Transferase(Phosphotransferase) domain 1 93 276 - -
Viun6g00458 371 CDD STKc_SnRK3 12 267 - -
Viun6g00458 371 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 365 - -
Viun6g00458 371 Pfam Protein kinase domain 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g00458 371 Pfam NAF domain 307 366 IPR004041 GO:0007165
Viun6g00458 371 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Viun6g00458 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Viun6g00458 371 SMART serkin_6 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g00458 371 Gene3D Kinase associated domain 1, KA1 304 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00458 Viun-Chr6 12106376 12114116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00458 4 370 CBL-interacting serine-threonine protein kinases AT2G26980 80.163 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Viun6g00458 Pkinase 8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00458 - - qsu:112026068 645.58