Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00444 ATGGCTGAATTAGTTCTCTACTTTTCAGCTCTTTTCTTCTGTGTCTTCACAACCCTTATACTCAGAAAATTAGGAAAGAAAGCTGATGACACAGCCACACCCTCTAACATGCCCAATGGGCCTACAAAGCTACCTATCATAGGTAACATACACAACTTGGTATCCTCTCATCCACATAGAAAATTAAGAGACCTGGCCTTAAAATATGGACCCTTGATGCATCTCCAACTTGGAGAGGTTTCTACCATTGTCATTTCATCCCCTGAGTGTGCTAAGGAAGTGATGAAAACCCATGACATTAACTTCGCCACAAGGCCTAAAGTCCTGGCCATTGATGTACTGAATTATAACTGCACAAGCATCGCTTTTGCTCCTTATGGAAATTATTGGAAGGAGGTAAGAAAAATTTCCATGTTGGAGTTCTTAAGCCAAAAACGTGTGAACTCATACGAGGCAATAAGAGAAGAGGAACTGTTCAATCTTGTGAAGTGGATAGATGCACAGAAAGGATCCCTCGTCAACCTCACTGAAGCTGTACTTTCATTCATTTATACAATTGCTTCAAGGGCTGCCTTAGGTAAGAAATTCAAAGACCATGACAACTTTATATCAGTTATTACAAAATTAACCAAACTTGCTGGAGGTTTCTACATCGGAGATTTTTTTCCTTCTGCTGTTTGGCTGCAACATGTAACTGGAATGAGGCAGAAGCTCGAGAGGTTGCATCAACAGGCTGATCGGATAATGGAAAACATTATCAATGAGGCCAAAGATTACCAAAGGGAAGCAGCAAATCTCTTGGATGTTCTGATACAGTACGAGAATGGCAGCAAGCCGGATTTTTCTTTAACCAGGAATAACATGAAGGCAATAATTATGGACATTTTTGGTGCTGGAGGTGAGACATCAGCAACAACCATTGATTGGGCCATGGCTGAAATGATGAAGAATTCAAGGGTAATGAAAAAAGCACAAGATGAGGTTAGAGAGGTATTCAACATGAAAGGAAGGGTCGATGAAAATTCTCTGCATCAACTAAAATATTTGAAACTAGTTGTAAAAGAAACCTTAAGATTGCACCCTCCAACTCCTCTATTGCTTCCAAGAGAATGTGGTGAAACATGTGAGATTAGTGGCTATAAGATACCAGCCAAAAGCAAGGTGATAGTGAATGCTTGGGCAATTGGAAGAGATTCCAACTACTGGACTGAACCAGAGAGCTTTTTTCCAGAGAGATTCATTCACAGCCATATTGACTACAAAGGAAATGACTTTGAGTACATTCCTTTTGGAGCTGGAAGAAGGATATGTCCGGGAATCACATTTGCATCCAGAGTTATTGAATTGGCCCTTGCAAGCTTGCTCTATCACTTTGATTGGAAGCTTCCAAGTGGAATGATAAATGAAGATTTGAACATGACTGAGGACTTTGGAGTCACAGTTCGAAGAAAGCATCATCTGTTCTTGCTTGCCTTTCCTTATCTTCCTCTCTCTGTCCCATCAATTTCACATTAA 1515 0.404 MAELVLYFSALFFCVFTTLILRKLGKKADDTATPSNMPNGPTKLPIIGNIHNLVSSHPHRKLRDLALKYGPLMHLQLGEVSTIVISSPECAKEVMKTHDINFATRPKVLAIDVLNYNCTSIAFAPYGNYWKEVRKISMLEFLSQKRVNSYEAIREEELFNLVKWIDAQKGSLVNLTEAVLSFIYTIASRAALGKKFKDHDNFISVITKLTKLAGGFYIGDFFPSAVWLQHVTGMRQKLERLHQQADRIMENIINEAKDYQREAANLLDVLIQYENGSKPDFSLTRNNMKAIIMDIFGAGGETSATTIDWAMAEMMKNSRVMKKAQDEVREVFNMKGRVDENSLHQLKYLKLVVKETLRLHPPTPLLLPRECGETCEISGYKIPAKSKVIVNAWAIGRDSNYWTEPESFFPERFIHSHIDYKGNDFEYIPFGAGRRICPGITFASRVIELALASLLYHFDWKLPSGMINEDLNMTEDFGVTVRRKHHLFLLAFPYLPLSVPSISH 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00444 504 Coils Coil 231 269 - -
Viun6g00444 504 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00444 504 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00444 504 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00444 504 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00444 504 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00444 504 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00444 504 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00444 504 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00444 504 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00444 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Viun6g00444 504 Pfam Cytochrome P450 38 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00444 504 SUPERFAMILY Cytochrome P450 38 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00444 504 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00444 504 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00444 504 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00444 504 FunFam Cytochrome P450 71D8 30 491 - -
Viun6g00444 504 CDD CYP71-like 68 487 - -
Viun6g00444 504 Gene3D Cytochrome P450 31 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00444 504 PANTHER CYTOCHROME P450 71B11-RELATED 19 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00444 Viun-Chr6 11939781 11941638 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00444 38 497 Cytochrome P450 AT3G26330 41.489 9.48e-130 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00444 - - gmx:100778572 771.541