Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00443 ATGGCTGAACTAGTCCTCTACTCTTCAGCTCTTTTCTTCTTTATCTTCTTAACCCTTATAGTGAGAAAAATAGGAAAAAAAAACAAGAAAGATGAGGAAACACCTTGTAACATGCCTCATGGACCTAGAAAGCTACCTATCATAGGAAATATACACAATATGCTATCCTCTCTGCCCCATAGAAAATTAAGAGACATGGCTTTGAAATATGGACCCTTGATGCATCTTCAACTTGGAGAGGTTTCTACCATTGTCATTTCATCAGCCGAGTGTGCTAAGGAATTGATGAAAACCCATGATATTAACTTTGCCACAAGGCCTAAAGTCCTAGCTATTGATGTAGTCAGTTACAACTGTACAAACATTGCCTTTTCTCCTTATGGAAATTATTGGAGGCAGCTAAGAAAGATTTGCACATTAGAGCTTTTAAGCCTAAAACGTGTAAACTCATACCAGCCAATTAGAGAAGAGGAGTTCACGAATCTTGTGAAAAGGATAGATGCGCATAAAGGATCCCCCATCAACCTCACTGAAAATGTACTTTCAACAATTTATACAATTGTTTCAAGGGCTGCCTTTGGCAAGAAATGCAAAGACCATGATAACTTTATATCGGTGATTACAAAAATAACCAAAGTTGCTTCAGGTTTTTACATTGGAGATTTCTTTCCTTCTGCTGTTTGGCTGCAACATATCACTGGCATGAGGCATAAGCTCGAGAGGGTGCATCAAGAAGCTGATCAGATAATGGAAAACATCGTCAATGAGCATAAAGAGGCAAAGTCTAAGACCAAAGATCACGAAAGGGAAGCAACAGATCTTGTGGATGTTCTCATACAGTACGAGGATGGTAGCAAGCAGGATTTCTTTTTAACCAGGGACAACATCAAGGCAATAATTCTGGATATTTTTGGTGGTGGTGGTGAGACATCATCAACAACCATAGATTGGGCAATGGCTGAAATGATGAAGGATTCAAGAGTAATGAAAAAAGCACAAGCTGAGGTAAGAGAGGTATTCAACATGAAAGGTAGGGTTGATGAAAATTACCTGAATGAACTGAAATATTTGAATCTAGTTGTGAAAGAGACATTGAGATTACACCCTCCAACTCCTCTTTTGCTTCCAAGAGAATGTGGTGAAGCATGTGAGATACATGGTCTTCACATACCTGCCAAAAGCAAGGTCATAGTGAATGCTTGGGCAATTGGAAGAGATCCAAACTCTTGGACCGAACCAGAGAGATTTTATCCCGAGAGATTCATTGATAGCAATATTGACTACAAAGGGCGTAATTTTGAGTTCATTCCTTTTGGTGCTGGAAGAAGAATGTGCCCAGGCAGCACATTTGGTTTCAGAACTATTGAACTTGGCCTTGCAATGTTGTTGTATCACTTTGATTGGAAATTTCCCAGTGGAATGACAGGTGAAGAATTGAACATGGGTGAGGTGTTTGGAATCACAATGAGAAGAAAAGATGATCTGTACCTGGTCCCTTCTCCTTATCATCCTTTGCCTGTCACATGA 1527 0.3962 MAELVLYSSALFFFIFLTLIVRKIGKKNKKDEETPCNMPHGPRKLPIIGNIHNMLSSLPHRKLRDMALKYGPLMHLQLGEVSTIVISSAECAKELMKTHDINFATRPKVLAIDVVSYNCTNIAFSPYGNYWRQLRKICTLELLSLKRVNSYQPIREEEFTNLVKRIDAHKGSPINLTENVLSTIYTIVSRAAFGKKCKDHDNFISVITKITKVASGFYIGDFFPSAVWLQHITGMRHKLERVHQEADQIMENIVNEHKEAKSKTKDHEREATDLVDVLIQYEDGSKQDFFLTRDNIKAIILDIFGGGGETSSTTIDWAMAEMMKDSRVMKKAQAEVREVFNMKGRVDENYLNELKYLNLVVKETLRLHPPTPLLLPRECGEACEIHGLHIPAKSKVIVNAWAIGRDPNSWTEPERFYPERFIDSNIDYKGRNFEFIPFGAGRRMCPGSTFGFRTIELGLAMLLYHFDWKFPSGMTGEELNMGEVFGITMRRKDDLYLVPSPYHPLPVT 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00443 508 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00443 508 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00443 508 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00443 508 SUPERFAMILY Cytochrome P450 39 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00443 508 CDD CYP71-like 69 495 - -
Viun6g00443 508 FunFam Cytochrome P450 71D8 31 499 - -
Viun6g00443 508 PANTHER OS08G0105600 PROTEIN 62 504 - -
Viun6g00443 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Viun6g00443 508 Gene3D Cytochrome P450 31 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00443 508 Coils Coil 239 270 - -
Viun6g00443 508 Pfam Cytochrome P450 39 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00443 508 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00443 508 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00443 508 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00443 508 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00443 508 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00443 508 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00443 508 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00443 508 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00443 508 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00443 Viun-Chr6 11909614 11911461 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00443 8 503 Cytochrome P450 AT1G13110 41.765 5.57e-139 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00443 - - gmx:100778572 806.208