Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00401 ATGGCCAAGGTTGGACTAAAGATAAAGCTGTTTACAGGATCTTCACTAAAAGATGTGGCTTTAGAAGTAGCCATAGACCTACAGGCAACTTGGGTGATACTTGACAGGAAAATGAAGAAAGATGAGGAGTTTTTCCTGCAGAGGCTTTCTTGTGGTATATCTATATTAAAGAGTAACGATCGGATACTTCGACTAAGAGGGCCTTTAGATGTTCCAGATGAAATACCATGTAACAGCCATGAGACATATGATGAAAGTTTACCAAGTGATATTGTGGCCTTGTTTCATTGCATGTTTCAGTATAATCTCTTTGAACACCTTATTGCAACTAAGAACAATCTAATGATAGGAAAACTTGAAGATGATGAACAGAACCAGATACAAATTAGGACCTATGAGGAAGAGGGTTGCTCGAATGATAAAGCCAATATCAATGAAAATATATTTCCAGCTAGTCCGAATCACCTGAGCATGGATGGAACAGAAATAAATAGTAATCAAATGATAGATAAAATAGAAAGAGCTGAGCAAGGCCACCATCATGAACAGATGCAAAACATGTCCCTTGAGATGGTGGGGGACACAGCAATTATGATTAAAACGGATCAAGGACCTGCTCAGGAAATAGCTGATCAACCAAGCAAAGATGAAGAGAGGAGAAACAACTTCTTCCATGGTGAGAATTGGGACTGGAGCAATCCAGAAATGAGTGAGGAAATGATTGATCAACCAATAGATGATTTGCTGAGTAAGAATCATGCACAGACATTGAGCATTTTCAGTGCTGCTATATTGGATGGTGGAGAGCAAGAGAAAAGTATTTTGGAAAATTCGATGTACAATTTCTGCTCTGTCTGCAAAATTAGACGACCAAATATTGTGGGCCAAAAGGAATTTACTTATGAAGAACTCCTAGCAGCCACAGATGCATTTTCATTGAAGAACTGTCTCTCCAAAAGTGGATCTCTATTCACTTTCAGAGGCCAGCTGGAAGGAGGAATGAAACTAGTGGTTAAGAAGCATGATGTCACTAAAACTCAAGTAAGGGAGAAAGTAAAGTCACAAATTCAAACCATCCTCAAAGCTAGACATAAGAATGTGATTACGCTCTTGGGCTCATCTACAGCAGAATCTTTCCTGTTTACTGTATATGAGTATGCTTGCAATGGTTCACTTGACAAAAGAAAGCTCCAGACCATTGACCTGGAAAGAAAGGAAAAGAGTGGTAATAGGCCTTGCCAGAGGCCTCAAATTGGAGATTACAACTTTGGGAAAGAACAAGAATTGAAGTCCTACAAAAATAAAAACAAAGAGAATTATGAATACGTAGCTCCAGAATACCAGGAGAAAGGGAAATTATCATCAAAGGCAGATGTATACTCTTTTGGTGTAGTTATTTTAGAGTTGATCGCTGGGCGAAGGACTACAGATTTCACGTCAGAAGATAAAAGCCTTGTTGAATGGGCAAAGCCTCTTCTTAAAAAGAAGAACTACTCAGAATTGGTGGATCCCATAATCAGAAATTCATACGAAGAGGATCACCTTCGTTGGATGGTCCAAGTAATAGCAGAATGTTTAGAAAAGAATCCTAAGAAAAGGTCATCAATGAATATGGTTGTTTCTGCATTACAAGGCATAGCAGAGAGTGAACTCGACCACATGACAGAAGATATTACTCCAGCTATATCAGATTCGAGAAGTGTGCCAGAAATAAATGGTTCTCAAGATGTGGGTTCAACAAAAACTAAAGCTGATCAGAAAAATCAGAAAGTCGAGCAAATTGAGAGCATACTTGGTGGGGAGAATAATCTCTTTTACAAAGCAAACCAGGGAAACTCTGATAAACTCGGACATAACGAAGAACAGAAGCAAAGAAGGTCTCGAGGGAAGGATAGGAGCTCAGGAAAGATGATAGCGAATGACCACAGAATGGACGAGAGAGAAATTGATCAGCTGAATGAGTTTGAGGAACAGATTCCAAGCACACTCCATATGGAGGGCATCAGAACACAAAAAATTAGTGTTGATGGCATAATGGGCCACACAAAAGTTGACCAACTGAGCCAAGATCAAGAAGGAAATAGCTTTGCTAAAATGATGGAGGTAGGATTAATACCAGAGGTTGATCAGCTGGTCCATGATAAAACTCAAACACAGAGAAGCTTCCATGAGAACTTACAGGATGGACGCCAAGGTGAAACAATTTTGGAGAATTCAAAATCCTCTGCATGCTCTATTTGTAGAAGTAGACGACCAAACAATGCATGCTCAGAAGACTTTGCTTATGATGAACTTCTAGAAGCTACAGAAGGATTTTCCACTGAGAACTCTCTATCTGGAAATGAAGATGGACCTACTTTCCAAGGCCTTATAGAGGGACGGGTAAAAATTGTTGTTAAGAAATATCAAGTCAATGCCTCCCAAGAACAGAAGATAATAAAATCAGAAGCAAAGCTGCTCATCAGTGCTAGACATAAAAATGTGGTCATGCTGTTGGGTTTATGTACAAATGAAAGCCAACTGATGGTTGTGTTTGAGAAAGTATGCAACGGTTCACTTGAGCAGTACCTAACAAGGGGAAGTTTCAAGTCATTGACTTGGAAGCAAAGGCTGAAAGTAATAATGGGTACTGCCAGAGGTTTGAAGTACCTACATGGGAAAGACATAATCCACGGAAATATAAAGCCAAGTAATATTCTTCTAACACATGAGTTTGACCCACTGATTGGAGATTTCCACTTCGGACAACAGAAAGTTGGACCAAAGAAATCCAGAAAAGATAAAAGTGTAAGAAATTCTGAATATTCAGCACCTGAGTATCTGGAAAATGGAAAACTATCTTATAAGACAGATGTATACTCCTTTGGTGTGGTTCTTTTGGAGCTGATCAGTGGCCGGAGGGCTGCGGACAAATTACCAGATGGAAAAAGCCTTGTTAACTGGGCCAGGCCCCTACTGACAGGAAAGAAGTACCGCCCGTTGTTGGATGGGAAAATCAGTAACTCCTGTGAAGAAGAAAAACTTGTATGGTTGGTCCAAGTAACAGAACAATGTCTCAAAAAGAATCCCAATGATAGATATTCAATGAATGTGGTTCTATCTTCCTTACAAGGAATAGAAGAATCAATTGAGTGTTGTGAAATTCAAGATTCTTCTCTAGAAAATTCATATTCAAATGATCTCCCCACGAGTAGTACACAAGGTCATATGAAGGCTGATCAAGTGAAGAAACAGGAACAAGAATTGATCGACAGAAACCAATACAAGGAAGAAAGCAGTAAAAGATTGACAGTTAAAACCAATCACAAGAATGATCATAGAAATGAAGATCGGATGATACAGGGTGAAGAAGATGTGCAGAGGAGTCCCCATGAGGAGATGTTCGGGGTAAGACCTATCAGCAATGACATGATTGATCAGATAAACCCTGTCCAACAATTCCAGGAAAAACTGCACATTAAGGGAAGCTTTGAGATAGAAGAAATGGGTAAAGAAGTAGATAAGAAACTAATGGTGAGCAAGGATAAAACACAAATACAGGGAAGCTGTGATGATAGTTTATTGAATGGGAGTGAAGGCCAAATCATTTTGGGAAATTCAAAGTCTTCTGATTGCTCAATCTGCAAAAGTAGTCGACCAAACAGTGGATTGCAAAGGAAATATACTTATGAAGAGCTTCAAGCTTCTACAGAAGGATTCTCAGTTAAGTACTCTCTATGTGAAGGTGAATATGGACCTGCTTTCAGAGGCCAGCTAGAGAATAACCAGGAAATAGTGATTAAGCAACATGCATTCACAAACTTACAGGAGCAGAAGGTGTTCATGTCAGAATTCCAATTGCTTATAAATGCCAGACATGAAAACGTGATCATGCTGTTGGGTTCATGCATACGATTAAGTCAATTGCTGATTGTGTATGAGAAGGCATGCAACGGTTCTCTTGACCTGTACTTATCAAGAGAAAGTGGTAGAACACTGACTTGGGGAGAAAGGGTGAAAGTTGCAATAGGTGTTGCCAGAGGTCTAAACTATCTACATGAGAATAATATAGCACATGGAGGAATAAAACCAAGTAACATTCTTCTAAATCATGAGTTGAAACCACTGGTAGGAGACTTTGTGTTTGGAAAAGAAAGATGTGAATTAAAAAATCTCAAAAGACTTAAAAGAATGAGGAATTGTGGACGCACTGCACCAGAGTGTTATGAGAGTGGAATACTATCGACTAAGGCAGATGTATACTCTTTTGGTATAGTTCTTGTGGAGTTGATCACTGGCCGTATGATTACAGAAAAAATATCAGGAGAGAGATGTCCCACTGAATGTATAAGGTCACTTCTTGAAGAACAAAAGTTTCTACTGTTGGTAGATCCCAAAGTCAGCAGCTCCTATGATGAGCAACAACTAGTTGCATTGGTCCACGTGATAGAAAACTGTCTGAGAAAGAATCCAAACGAAAGGTTCACAATGGATATGGTTGTCTCTGCATTGCCATCTATAGTAGATTGCAGTGACACATATGTAAAGGAAGACTTTGCACCAGAAAACTCTCATGTTTCAGAAGTAACAAACTCAAGAGTGAAGGAGGAACCACCAAATGAAGAAGATTTAGGCATGGAGAATAGTGAAGAAAAAGGGGACAACGTAACTTATAATGGAGGCAATGAAACAGAAATACGTCAAGAGTGTGACAGCAACCCAATTGGTTGTGAAAATAGTAAGGAAACAGAAGAAAAAGAAAGCTTAAGCATCAAGATATGTTGGGAAGGTTGTTCATCCTATGGTGGAGCTAGAGAATTTTATCTCGAAGGGATCAAAGAGTACACAGCATGTGAAGAACTTTTCGGCTTTGTGATTTAA 4860 0.3922 MAKVGLKIKLFTGSSLKDVALEVAIDLQATWVILDRKMKKDEEFFLQRLSCGISILKSNDRILRLRGPLDVPDEIPCNSHETYDESLPSDIVALFHCMFQYNLFEHLIATKNNLMIGKLEDDEQNQIQIRTYEEEGCSNDKANINENIFPASPNHLSMDGTEINSNQMIDKIERAEQGHHHEQMQNMSLEMVGDTAIMIKTDQGPAQEIADQPSKDEERRNNFFHGENWDWSNPEMSEEMIDQPIDDLLSKNHAQTLSIFSAAILDGGEQEKSILENSMYNFCSVCKIRRPNIVGQKEFTYEELLAATDAFSLKNCLSKSGSLFTFRGQLEGGMKLVVKKHDVTKTQVREKVKSQIQTILKARHKNVITLLGSSTAESFLFTVYEYACNGSLDKRKLQTIDLERKEKSGNRPCQRPQIGDYNFGKEQELKSYKNKNKENYEYVAPEYQEKGKLSSKADVYSFGVVILELIAGRRTTDFTSEDKSLVEWAKPLLKKKNYSELVDPIIRNSYEEDHLRWMVQVIAECLEKNPKKRSSMNMVVSALQGIAESELDHMTEDITPAISDSRSVPEINGSQDVGSTKTKADQKNQKVEQIESILGGENNLFYKANQGNSDKLGHNEEQKQRRSRGKDRSSGKMIANDHRMDEREIDQLNEFEEQIPSTLHMEGIRTQKISVDGIMGHTKVDQLSQDQEGNSFAKMMEVGLIPEVDQLVHDKTQTQRSFHENLQDGRQGETILENSKSSACSICRSRRPNNACSEDFAYDELLEATEGFSTENSLSGNEDGPTFQGLIEGRVKIVVKKYQVNASQEQKIIKSEAKLLISARHKNVVMLLGLCTNESQLMVVFEKVCNGSLEQYLTRGSFKSLTWKQRLKVIMGTARGLKYLHGKDIIHGNIKPSNILLTHEFDPLIGDFHFGQQKVGPKKSRKDKSVRNSEYSAPEYLENGKLSYKTDVYSFGVVLLELISGRRAADKLPDGKSLVNWARPLLTGKKYRPLLDGKISNSCEEEKLVWLVQVTEQCLKKNPNDRYSMNVVLSSLQGIEESIECCEIQDSSLENSYSNDLPTSSTQGHMKADQVKKQEQELIDRNQYKEESSKRLTVKTNHKNDHRNEDRMIQGEEDVQRSPHEEMFGVRPISNDMIDQINPVQQFQEKLHIKGSFEIEEMGKEVDKKLMVSKDKTQIQGSCDDSLLNGSEGQIILGNSKSSDCSICKSSRPNSGLQRKYTYEELQASTEGFSVKYSLCEGEYGPAFRGQLENNQEIVIKQHAFTNLQEQKVFMSEFQLLINARHENVIMLLGSCIRLSQLLIVYEKACNGSLDLYLSRESGRTLTWGERVKVAIGVARGLNYLHENNIAHGGIKPSNILLNHELKPLVGDFVFGKERCELKNLKRLKRMRNCGRTAPECYESGILSTKADVYSFGIVLVELITGRMITEKISGERCPTECIRSLLEEQKFLLLVDPKVSSSYDEQQLVALVHVIENCLRKNPNERFTMDMVVSALPSIVDCSDTYVKEDFAPENSHVSEVTNSRVKEEPPNEEDLGMENSEEKGDNVTYNGGNETEIRQECDSNPIGCENSKETEEKESLSIKICWEGCSSYGGAREFYLEGIKEYTACEELFGFVI 1619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00401 1619 Gene3D Phosphorylase Kinase; domain 1 277 386 - -
Viun6g00401 1619 Gene3D Phosphorylase Kinase; domain 1 1198 1307 - -
Viun6g00401 1619 PANTHER OS01G0253100 PROTEIN 251 394 - -
Viun6g00401 1619 MobiDBLite consensus disorder prediction 614 637 - -
Viun6g00401 1619 MobiDBLite consensus disorder prediction 1516 1548 - -
Viun6g00401 1619 ProSiteProfiles Protein kinase domain profile. 772 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g00401 1619 SUPERFAMILY Protein kinase-like (PK-like) 1215 1497 IPR011009 -
Viun6g00401 1619 MobiDBLite consensus disorder prediction 1516 1543 - -
Viun6g00401 1619 MobiDBLite consensus disorder prediction 564 582 - -
Viun6g00401 1619 FunFam Proline-rich receptor-like protein kinase PERK8 1195 1308 - -
Viun6g00401 1619 ProSiteProfiles Protein kinase domain profile. 195 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g00401 1619 Pfam Protein tyrosine and serine/threonine kinase 1236 1497 IPR001245 GO:0004672|GO:0006468
Viun6g00401 1619 Pfam Protein tyrosine and serine/threonine kinase 419 543 IPR001245 GO:0004672|GO:0006468
Viun6g00401 1619 Pfam Protein tyrosine and serine/threonine kinase 793 1035 IPR001245 GO:0004672|GO:0006468
Viun6g00401 1619 Gene3D Transferase(Phosphotransferase) domain 1 1310 1521 - -
Viun6g00401 1619 Gene3D Transferase(Phosphotransferase) domain 1 407 565 - -
Viun6g00401 1619 Gene3D Transferase(Phosphotransferase) domain 1 848 1059 - -
Viun6g00401 1619 MobiDBLite consensus disorder prediction 564 589 - -
Viun6g00401 1619 Gene3D Phosphorylase Kinase; domain 1 748 846 - -
Viun6g00401 1619 SUPERFAMILY Protein kinase-like (PK-like) 296 561 IPR011009 -
Viun6g00401 1619 ProSiteProfiles Protein kinase domain profile. 1233 1500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g00401 1619 MobiDBLite consensus disorder prediction 607 637 - -
Viun6g00401 1619 SUPERFAMILY Protein kinase-like (PK-like) 762 1045 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00401 Viun-Chr6 11235664 11248483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00401 299 549 Trihelix Transcription Factor Family AT5G38560 30.847 1.02e-32 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Viun6g00401 PK_Tyr_Ser-Thr 1.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00401 - - vun:114188408 3210.24