Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00385 ATGATGGCCCTAGCTATGGTGGGAGAGGCCCTTATCTCTGCTTGTGTGGAGGCCTTGATAAAAAGAATAGCTTCTAGACAGTTTAGAGATTTCTTCTCCAGTAGAAAGCTGAATATTTCTTTGCTGGATGAGTTGAAGACGACTCTATTGGCACTTAGTGCTGTGCTCAATGATGCTGAGGAGAAGCAGATCACAGAACCTGCAGTGAAGGAATGGCTTGATGAGTTGAGAGATGCTGTCTTAGATGCAGAAGATTTGTTGGATGAAATCAACACACATGCTTTGAGATGCAAAGGGGTGGGAGAATCTACAAAATTTGTTACAAAGGTAAGATCTTTGCTTTCTTCTCGCTTTAAAAACTTGTACATGGGTATGAATTCCAAGTTTGAAGCAATATCTAGAAGGCTAGAACAGTTTGTTAGACAAAAAGATATTCTTGGCTTGCAAAGTGTTTCTAGGAGAGTCTCTTATAGAGCAGTAACAGATTCACTGGTTGAATCCGTTGTGGTTGCTAGAGAGAATGACAGGGAGAAGCTACTTAGCATGCTTGTATGTGATGATGGTGATGGCATGTGTAATGATGTAGAAGTGATCACAGTATTGGGCATGGGGGGTCTGGGAAAAACAACCCTTGTTCAATGCCTTTACAATGACAGTGAAGTGCAGAAACATTTTGATTTGACAGCTTGGGCGTGTGTGTCAGATGATTTTGATATTCTCAATGTAACGAAAAAAATTGTTGAATCTCTCACATCCAAAGACTGTCACATCACTAATCTTGATGTGCTTCGTGTTGAATTGAAGAATAACCTAAGAGATAAGAAATTTCTGCTTGTGCTTGATGACCTTTGGAATGAAAAGTATAACGATTGGCATAACCTAATAGCACCTTTTAGAAGTGGGAGAAAGGGAAGTAAAATCATTGTTACAACCAGACAACAAAGAGTTGCACAGGTCACACATACATTTCCCACTTACGAGCTGAAACCTCTTAGTGATGAAAATTGTTGGCGTATACTGGCCAGACATGCATTTGGAAGTGAAAACTACCACAATTATCCAATCCTAGAAGAAGTTGGGAAAAAAATTGCAAGAAAATGTAATGGTCTTCCATTGGCAGCTAAAACATTGGGAGGCCTTTTGAGATCAAATGTTGATGTTGTGGAATGGAATAGAATTCTGAACAGCAATTTGTGGGCACACGATGATGTTTTACCTGCTTTGCGCATCAGTTATTTTCATCTTCCAGCACATTTGAAGAGATGTTTTGCTTATTGCTCCATTTTTCCAAAACAACATTTGTTGAATAGGAAGGAATTAATTTTGTTATGGATGGCTGAAGGCTTTCTTCAACACATTCATGAAGACAAAGAAATGGAATCAGTGGGTAATGACTGCTTCAATGAGCTATTATCTCGATCCTTAATTCAAAAAGACAATGCTGTTGCAGAGGAAAATTTCCGAATGCATGACCTCATCTATGATTTAGCTAGACTTGTGTCTGGAAGAAGTTCTTACCACTTTGATGGCAGTGAAATCCCAAGAACCGTTCGCCATTTATCATTTCTCAGAGAGATGTTTGATATCTCTGAAAAATTTGAGGGCTTGTATGAGCTGAAGTGTTTGCGGACCTTTCTACCACGATTGTCATATCCATTTGTGCAATGTTACTTAACCAAAATGGTATCACATGGTTGGTTGCCAAAACTAAGATGTTTGCGAATACTTTCGTTGTCTAAATACACTAACATCACTGAGTTGCCTAATTCGATTGGCAATTTGTTGCACTTGAGGTATCTGGATCTTTCCTACACTTCAATTGAAAGCTTGCCCGATGAAACATTTATGCTTTACAATTTGCAAACTTTGATATTATCAAATTGTGAATCTCTTATTCAATTGCCGCAGAAGATAGGAAATCTGACCAACTTACGCCACCTTGACATCAGTGACACTAATTTGACAGAGATGCCAACACAAATATGCAAATTGCAAGAACTCCGTACCTTGACAGTTTTTATTGTTGGAAGACAAGGTGGACTAAGTATCAGAGATTTATCCAAACTTCCCTATCTTCAGGGCAAGCTTTCCATCATGAACCTGCAAAATGTTGTCAATCTTGTGGACGTTTTTGGGGCCAATTTAAAGAAAAAAGAGCAGATCGAGGAGCTTATTCTAGGATGGGGCAGTGATCCACATGAACCGCAGTTTGAAAAGGATGTACTTGACAACTTGCAACCATCAATAAATTTGAAGAAACTCAGTATCAAATGTTATGGTGGCACTTCCTTTCCAAATTGGATTGGACATTTTTCATTTTCCAAGATCACAGTCCTTACTATAAGTGATTGCAACAATTGCTTGTCACTTCCACCCTTTGGACAACTACCTTCTCTGAAGGAGCTTGTTATCAAAAGGATGAAAATGGTGAAGAAAGTTGGTGATGAGTTCTATGGCAGCAATGTAGGCTCACAGTTGTTTCAGCCATTTCAATCACTAGAGAATCTGGAATTTGAAGATATGTCCGAGTGGCAGGAATGGCTACCGTTTGAGAGTGAAAACAGAAACTTTCCTTTTCCATGTCTTAAGACTTTGTACCTCTACAAGTGCCCCAAGCTGAGAGGAACCTTGCCAACTCATCTACCTTCACTAACAAATGTGATTTTCTCAGAGTGCAACCAGCTGGTGACAAAATTATCTGATGTGCATTGGAATACATCAATTGAAGCAATACATATTAGAGAGGGACAAGAAGCCTTGTTGTCTATGCTTGACAATTTCTCTTATTGTGAGCTATTGATTGAAAAGTGTGATAGCTTACGGTGTTTGCCCAGAATGCCACTTGCTGCAAATTGTCTTCAAAAGTTGACTCTTACAAATATCCCATCTTTGATTTACTTCCCAGCTGATTGTTTGCTCACATCATTGCGATCACTTGACATTTGGCATTGTAGAAACTTAGAGTTCCTATCTCACAATACATGTCCTAAATTCAAATCACTTGAAACACTGAGAATATGGAACAGTTGCAGTTCCCTGACATGTTTTTCATTAGCTTTTTTACCTGTCCTTCAAGAGCTTCATATCCGTTTTATTCCCAACTTGGAAGCAATTACTACTCATGGGGGAGAAGCAGCTCCGAAACTAGTTGATTTTATTGTCACTGATTGTGAGAAACTCAGATCACTGCCAAATCAAATTGATCTCCCTTCCCTTGAACACTTGGATCTATCTGGGCTTCCCATGCTAGAATCATTGTCTCCAAGGTGTTTTCCTTCTTCTTTAAAATCACTTCATGTTGATATTGGAATACTATCATCTGTATCCAAAAAAGAGTTAGGTGTGTTATTCCAACGCCTATCTTCTCTGTCACATCTTCTAGTCAAGGGTCTTGGTGATGAAGATCTTGTTAACACTCTTTTGAAGCAGCAGTCTCTGCCTACTTCCCTAGAATATCTGTTCCTTAATAATTTCAGTGGCTTAAAGTTGTTGGAAGGAAAAGGGCTTAAAAATCTCACTTCTCTCCAAATGCTTCAAATGTACAACTGTCCTAGTATTGAGTCCTTACCAGAGGGTCAACTTCCACACTCTCTTCAAGTACTCAGTCTTAGGGAGTGCCCTTTACTGGAAGCAAGATATCAAAATCATAAATACTGGTCTAAAATCGCTCACATTCCTGCAATCAAGATAAATGAAAAAGTCATAATATGA 3711 0.3888 MMALAMVGEALISACVEALIKRIASRQFRDFFSSRKLNISLLDELKTTLLALSAVLNDAEEKQITEPAVKEWLDELRDAVLDAEDLLDEINTHALRCKGVGESTKFVTKVRSLLSSRFKNLYMGMNSKFEAISRRLEQFVRQKDILGLQSVSRRVSYRAVTDSLVESVVVARENDREKLLSMLVCDDGDGMCNDVEVITVLGMGGLGKTTLVQCLYNDSEVQKHFDLTAWACVSDDFDILNVTKKIVESLTSKDCHITNLDVLRVELKNNLRDKKFLLVLDDLWNEKYNDWHNLIAPFRSGRKGSKIIVTTRQQRVAQVTHTFPTYELKPLSDENCWRILARHAFGSENYHNYPILEEVGKKIARKCNGLPLAAKTLGGLLRSNVDVVEWNRILNSNLWAHDDVLPALRISYFHLPAHLKRCFAYCSIFPKQHLLNRKELILLWMAEGFLQHIHEDKEMESVGNDCFNELLSRSLIQKDNAVAEENFRMHDLIYDLARLVSGRSSYHFDGSEIPRTVRHLSFLREMFDISEKFEGLYELKCLRTFLPRLSYPFVQCYLTKMVSHGWLPKLRCLRILSLSKYTNITELPNSIGNLLHLRYLDLSYTSIESLPDETFMLYNLQTLILSNCESLIQLPQKIGNLTNLRHLDISDTNLTEMPTQICKLQELRTLTVFIVGRQGGLSIRDLSKLPYLQGKLSIMNLQNVVNLVDVFGANLKKKEQIEELILGWGSDPHEPQFEKDVLDNLQPSINLKKLSIKCYGGTSFPNWIGHFSFSKITVLTISDCNNCLSLPPFGQLPSLKELVIKRMKMVKKVGDEFYGSNVGSQLFQPFQSLENLEFEDMSEWQEWLPFESENRNFPFPCLKTLYLYKCPKLRGTLPTHLPSLTNVIFSECNQLVTKLSDVHWNTSIEAIHIREGQEALLSMLDNFSYCELLIEKCDSLRCLPRMPLAANCLQKLTLTNIPSLIYFPADCLLTSLRSLDIWHCRNLEFLSHNTCPKFKSLETLRIWNSCSSLTCFSLAFLPVLQELHIRFIPNLEAITTHGGEAAPKLVDFIVTDCEKLRSLPNQIDLPSLEHLDLSGLPMLESLSPRCFPSSLKSLHVDIGILSSVSKKELGVLFQRLSSLSHLLVKGLGDEDLVNTLLKQQSLPTSLEYLFLNNFSGLKLLEGKGLKNLTSLQMLQMYNCPSIESLPEGQLPHSLQVLSLRECPLLEARYQNHKYWSKIAHIPAIKINEKVII 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00385 1236 FunFam Probable disease resistance protein At1g61300 151 322 - -
Viun6g00385 1236 Pfam NB-ARC domain 193 395 IPR002182 GO:0043531
Viun6g00385 1236 PRINTS Disease resistance protein signature 270 284 - -
Viun6g00385 1236 PRINTS Disease resistance protein signature 615 631 - -
Viun6g00385 1236 PRINTS Disease resistance protein signature 367 381 - -
Viun6g00385 1236 PRINTS Disease resistance protein signature 197 212 - -
Viun6g00385 1236 SUPERFAMILY L domain-like 932 1210 - -
Viun6g00385 1236 Pfam Rx N-terminal domain 13 103 IPR041118 -
Viun6g00385 1236 Gene3D Ribonuclease Inhibitor 1101 1229 IPR032675 -
Viun6g00385 1236 Gene3D - 40 125 - -
Viun6g00385 1236 Gene3D - 411 499 IPR036388 -
Viun6g00385 1236 SUPERFAMILY L domain-like 488 912 - -
Viun6g00385 1236 Gene3D - 330 410 IPR042197 -
Viun6g00385 1236 Gene3D - 151 323 IPR027417 -
Viun6g00385 1236 Gene3D Ribonuclease Inhibitor 993 1100 IPR032675 -
Viun6g00385 1236 Pfam Leucine rich repeat 596 654 IPR001611 GO:0005515
Viun6g00385 1236 Coils Coil 69 93 - -
Viun6g00385 1236 PANTHER DISEASE RESISTANCE PROTEIN RP 44 984 IPR044974 GO:0006952
Viun6g00385 1236 FunFam Probable disease resistance protein At1g63360 412 499 - -
Viun6g00385 1236 SMART LRR_typ_2 1069 1093 IPR003591 -
Viun6g00385 1236 SMART LRR_typ_2 641 664 IPR003591 -
Viun6g00385 1236 SMART LRR_typ_2 594 617 IPR003591 -
Viun6g00385 1236 Gene3D Ribonuclease Inhibitor 534 917 IPR032675 -
Viun6g00385 1236 ProSiteProfiles Leucine-rich repeat profile. 596 617 IPR001611 GO:0005515
Viun6g00385 1236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 426 IPR027417 -
Viun6g00385 1236 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00385 Viun-Chr6 10674143 10678173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00385 194 802 WRKY Transcription Factor Family AT5G45050 22.289 3.27e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00385 - - gmx:100803330 1966.04